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The endoplasmic reticulum stress-related genes and molecular typing predicts prognosis and reveals characterization of tumor immune microenvironment in lung squamous cell carcinoma.

作者信息

Wang Ruolan, Huang Yanhua, He Juan, Jin Shan, Li Xin, Tan Kun, Xia Wei

机构信息

College of Pharmacy, Dali University, Dali, 671000, Yunnan, China.

Department of Pharmacy, 920th Hospital of Joint Logistics Support Force of People's Liberation Army, Kunming, 650032, Yunnan, China.

出版信息

Discov Oncol. 2024 Feb 16;15(1):37. doi: 10.1007/s12672-024-00887-4.


DOI:10.1007/s12672-024-00887-4
PMID:38363409
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10873263/
Abstract

BACKGROUND: Endoplasmic reticulum stress (ERS) acts critical roles on cell growth, proliferation, and metastasis in various cancers. However, the relationship between ERs and lung squamous cell carcinoma (LUSC) prognoses still remains unclear. METHODS: The consensus clustering analysis of ERS-related genes and the differential expression analysis between clusters were investigated in LUSC based on TCGA database. Furthermore, ERS-related prognostic risk models were constructed by LASSO regression and Cox regression analyses. Then, the predictive effect of the risk model was evaluated by Kaplan-Meier, Cox regression, and ROC Curve analyses, as well as validated in the GEO cohort. According to the optimal threshold, patients with LUSC were divided into high- and low- risk groups, and somatic mutations, immune cell infiltration, chemotherapy response and immunotherapy effect were systematically analyzed. RESULTS: Two ERS-related clusters were identified in patients with LUSC that had distinct patterns of immune cell infiltration. A 5-genes ERS-related prognostic risk model and nomogram were constructed and validated. Kaplan-Meier curves and Cox regression analysis showed that ERS risk score was an independent prognostic factor (p < 0.001, HR = 1.317, 95% CI = 1.159-1.496). Patients with low-risk scores presented significantly lower TIDE scores and significantly lower IC50 values for common chemotherapy drugs such as cisplatin and gemcitabine. CONCLUSION: ERS-related risk signature has certain prognostic value and may be a potential therapeutic target and prognostic biomarker for LUSC patients.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11b2/10873263/4450c00b2d3d/12672_2024_887_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11b2/10873263/dfded32cdf40/12672_2024_887_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11b2/10873263/1dc136820692/12672_2024_887_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11b2/10873263/9de32f0f6a59/12672_2024_887_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11b2/10873263/0e4e52e8d2f8/12672_2024_887_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11b2/10873263/36fa65e1d589/12672_2024_887_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11b2/10873263/c540dc04f082/12672_2024_887_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11b2/10873263/4450c00b2d3d/12672_2024_887_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11b2/10873263/dfded32cdf40/12672_2024_887_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11b2/10873263/1dc136820692/12672_2024_887_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11b2/10873263/9de32f0f6a59/12672_2024_887_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11b2/10873263/0e4e52e8d2f8/12672_2024_887_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11b2/10873263/36fa65e1d589/12672_2024_887_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11b2/10873263/c540dc04f082/12672_2024_887_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/11b2/10873263/4450c00b2d3d/12672_2024_887_Fig7_HTML.jpg

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The endoplasmic reticulum stress-related genes and molecular typing predicts prognosis and reveals characterization of tumor immune microenvironment in lung squamous cell carcinoma.

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引用本文的文献

[1]
Prognostic value and anti-tumor immunity role of in pan-cancer: a bioinformatics study.

Transl Cancer Res. 2024-10-31

本文引用的文献

[1]
A new immune signature for survival prediction and immune checkpoint molecules in non-small cell lung cancer.

Front Oncol. 2023-1-30

[2]
Effects of Lipid Metabolism-Related Genes PTGIS and HRASLS on Phenotype, Prognosis, and Tumor Immunity in Lung Squamous Cell Carcinoma.

Oxid Med Cell Longev. 2023

[3]
Cancer statistics, 2023.

CA Cancer J Clin. 2023-1

[4]
KLK6/PAR1 Axis Promotes Tumor Growth and Metastasis by Regulating Cross-Talk between Tumor Cells and Macrophages.

Cells. 2022-12-16

[5]
Prostacyclin Released by Cancer-Associated Fibroblasts Promotes Immunosuppressive and Pro-Metastatic Macrophage Polarization in the Ovarian Cancer Microenvironment.

Cancers (Basel). 2022-12-13

[6]
Development and validation of a prognosis prediction model based on 18 endoplasmic reticulum stress-related genes for patients with lung adenocarcinoma.

Front Oncol. 2022-8-30

[7]
Cancer treatment and survivorship statistics, 2022.

CA Cancer J Clin. 2022-9

[8]
Cancer Stemness-Based Prognostic Immune-Related Gene Signatures in Lung Adenocarcinoma and Lung Squamous Cell Carcinoma.

Front Endocrinol (Lausanne). 2021

[9]
Current Status of Immune Checkpoint Inhibitor Immunotherapy for Lung Cancer.

Front Oncol. 2021-8-18

[10]
Lamprey Immune Protein Mediates Apoptosis of Lung Cancer Cells Via the Endoplasmic Reticulum Stress Signaling Pathway.

Front Oncol. 2021-7-7

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