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鉴定和表征 spp. 中的 CC-AMP1 样肽和 CC-AMP2 样肽

Identification and Characterization of CC-AMP1-like and CC-AMP2-like Peptides in spp.

机构信息

Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27514, United States.

Department of Molecular Biosciences, University of South Florida, Tampa, Florida 33620, United States.

出版信息

J Proteome Res. 2024 Aug 2;23(8):2948-2960. doi: 10.1021/acs.jproteome.3c00597. Epub 2024 Feb 17.

Abstract

Antimicrobial peptides (AMPs) are compounds with a variety of bioactive properties. Especially promising are their antibacterial activities, often toward drug-resistant pathogens. Across different AMP sources, AMPs expressed within plants are relatively underexplored with a limited number of plant AMP families identified. Recently, we identified the novel AMPs CC-AMP1 and CC-AMP2 in ghost pepper plants ( x ), exerting promising antibacterial activity and not classifying into any known plant AMP family. Herein, AMPs related to CC-AMP1 and CC-AMP2 were identified within both and . predictions throughout plants were utilized to illustrate that CC-AMP1-like and CC-AMP2-like peptides belong to two broader AMP families, with three-dimensional structural predictions indicating that CC-AMP1-like peptides comprise a novel subfamily of α-hairpinins. The antibacterial activities of several closely related CC-AMP1-like peptides were compared with a truncated version of CC-AMP1 possessing significantly more activity than the full peptide. This truncated peptide was further characterized to possess broad-spectrum antibacterial activity against clinically relevant ESKAPE pathogens. These findings illustrate the value in continued study of plant AMPs toward characterization of novel AMP families, with CC-AMP1-like peptides possessing promising bioactivity.

摘要

抗菌肽(AMPs)是具有多种生物活性的化合物。它们的抗菌活性尤其有前景,通常针对耐药病原体。在不同的 AMP 来源中,植物内表达的 AMP 相对较少被探索,仅鉴定出少数几种植物 AMP 家族。最近,我们在鬼椒植物( x )中鉴定出了新型 AMPs CC-AMP1 和 CC-AMP2,它们具有有前景的抗菌活性,且不属于任何已知的植物 AMP 家族。在此,我们在 和 中鉴定到了与 CC-AMP1 和 CC-AMP2 相关的 AMP。通过对植物进行的 预测,阐明了 CC-AMP1 样和 CC-AMP2 样肽属于两个更广泛的 AMP 家族,三维结构预测表明 CC-AMP1 样肽包含一个新颖的 α-发夹素亚家族。对几种密切相关的 CC-AMP1 样肽的抗菌活性进行了比较,结果表明一个截短的 CC-AMP1 版本比全长肽具有显著更高的活性。该截短肽进一步被表征为具有针对临床相关 ESKAPE 病原体的广谱抗菌活性。这些发现表明,继续研究植物 AMP 以鉴定新型 AMP 家族具有重要价值,其中 CC-AMP1 样肽具有很有前景的生物活性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6728/11296913/b6849c58e762/nihms-1972859-f0002.jpg

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