Stixová Lenka, Tichý Vlastimil, Bártová Eva
Department of Cell Biology and Epigenetics, Institute of Biophysics, Academy of Sciences of the Czech Republic, Královopolská 135, Brno, Czech Republic.
Heliyon. 2024 Feb 7;10(4):e25599. doi: 10.1016/j.heliyon.2024.e25599. eCollection 2024 Feb 29.
Chemical modifications in mRNAs, tRNAs, rRNAs, and non-coding RNAs stabilize these nucleic acids and regulate their function. In addition to regulating the translation of genetic information from mRNA to proteins, it has been revealed that modifications in RNAs regulate repair processes in the genome.
Using local laser microirradiation, confocal microscopy, dot blots, and mass spectrometry we studied the role of N7-methylguanosine (m7G), which is co-transcriptionally installed in RNA.
Here, we show that after UVC and UVA irradiation, the level of m7G RNA is increased initially in the cytoplasm, and after local laser microirradiation, m7G RNA is highly abundant in UVA-damaged chromatin. This process is poly(ADP-ribose) polymerase (PARP)-dependent, but not accompanied by changes in the level of m7G-writers, including methyltransferases RNMT, METTL1, and WBSCR22. We also observed that METTL1 deficiency does not affect the recruitment of m7G RNA to microirradiated chromatin. Analyzing the levels of mRNA, let-7e, and miR-203a in both the cytoplasm and the cell nucleus, we revealed that UVC irradiation changed the level of mRNA, and significantly increased the pool of both let-7e and miR-203a, which correlated with radiation-induced m7G RNA increase in the cytoplasm.
Irradiation by UV light increases the m7G RNA pool in the cytoplasm and in the microirradiated genome. Thus, epigenetically modified RNAslikely contribute to DNA damage responses or m7G signals the presence of RNA damage.
信使核糖核酸(mRNA)、转运核糖核酸(tRNA)、核糖体核糖核酸(rRNA)和非编码核糖核酸(ncRNA)中的化学修饰可稳定这些核酸并调节其功能。除了调节从mRNA到蛋白质的遗传信息翻译外,还发现RNA中的修饰可调节基因组中的修复过程。
我们使用局部激光微照射、共聚焦显微镜、斑点印迹和质谱法研究了在RNA转录过程中安装的N7-甲基鸟苷(m7G)的作用。
在此,我们表明,在紫外线C(UVC)和紫外线A(UVA)照射后,m7G RNA水平最初在细胞质中升高,而在局部激光微照射后,m7G RNA在UVA损伤的染色质中高度丰富。这个过程是聚(ADP-核糖)聚合酶(PARP)依赖性的,但不伴随着m7G写入酶水平的变化,包括甲基转移酶RNMT、METTL1和WBSCR22。我们还观察到,METTL1缺陷并不影响m7G RNA募集到微照射的染色质上。通过分析细胞质和细胞核中mRNA、let-7e和miR-203a的水平,我们发现UVC照射改变了mRNA的水平,并显著增加了let-7e和miR-203a的总量,这与辐射诱导的细胞质中m7G RNA增加相关。
紫外线照射增加了细胞质和微照射基因组中的m7G RNA总量。因此,表观遗传修饰的RNA可能有助于DNA损伤反应,或者m7G表明存在RNA损伤。