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茄科 CAMTA 基因家族的鉴定和分子特征分析,重点研究茄子基因在冷胁迫下的表达分析。

Identification and Molecular Characterization of the CAMTA Gene Family in Solanaceae with a Focus on the Expression Analysis of Eggplant Genes under Cold Stress.

机构信息

Horticulture Research Institute, Sichuan Academy of Agricultural Sciences, Chengdu 610066, China.

Vegetable Germplasm Innovation and Variety Improvement Key Laboratory of Sichuan Province, Chengdu 610066, China.

出版信息

Int J Mol Sci. 2024 Feb 8;25(4):2064. doi: 10.3390/ijms25042064.

Abstract

Calmodulin-binding transcription activator (CAMTA) is an important calmodulin-binding protein with a conserved structure in eukaryotes which is widely involved in plant stress response, growth and development, hormone signal transduction, and other biological processes. Although genes have been identified and characterized in many plant species, a systematic and comprehensive analysis of genes in the Solanaceae genome is performed for the first time in this study. A total of 28 genes were identified using bioinformatics tools, and the biochemical/physicochemical properties of these proteins were investigated. genes were categorized into three major groups according to phylogenetic analysis. Tissue-expression profiles indicated divergent spatiotemporal expression patterns of . Furthermore, transcriptome analysis of genes showed that exposure to cold induced differential expression of many eggplant genes. Yeast two-hybrid and bimolecular fluorescent complementary assays suggested an interaction between SmCAMTA2 and SmERF1, promoting the transcription of the cold key factor , which may be an important mechanism for plant cold resistance. In summary, our results provide essential information for further functional research on Solanaceae family genes, and possibly other plant families, in the determination of the development of plants.

摘要

钙调素结合转录激活因子(CAMTA)是一种在真核生物中具有保守结构的重要钙调素结合蛋白,广泛参与植物应激反应、生长发育、激素信号转导等生物学过程。虽然在许多植物物种中已经鉴定和描述了 基因,但本研究首次对茄科基因组中的 基因进行了系统和全面的分析。使用生物信息学工具共鉴定出 28 个 基因,并对这些蛋白质的生化/物理化学性质进行了研究。根据系统发育分析,将 基因分为三大类。组织表达谱表明, 在时空表达模式上存在差异。此外,对 基因的转录组分析表明,低温处理诱导了许多茄子 基因的差异表达。酵母双杂交和双分子荧光互补实验表明,SmCAMTA2 和 SmERF1 之间存在相互作用,促进了冷关键因子 的转录,这可能是植物抗冷的一个重要机制。综上所述,我们的研究结果为进一步研究茄科家族基因在植物发育中的功能提供了重要信息,也可能为其他植物家族提供了重要信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6f7/10888690/e601cc19556f/ijms-25-02064-g001.jpg

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