Guangdong Provincial Key Laboratory of Silviculture, Protection and Utilization, Guangdong Academy of Forestry, Guangzhou 510520, China.
Int J Mol Sci. 2024 Feb 11;25(4):2171. doi: 10.3390/ijms25042171.
is a precious timber and fire-resistant tree species widely distributed in southern China. Currently, there is little knowledge related to its growth traits, especially with respect to molecular breeding. The lack of relevant information has delayed the development of modern breeding. The purpose is to identify probable functional genes involved in growth through whole transcriptome sequencing. In this study, a total of 32,711 mRNAs, 525 miRNAs, 54,312 lncRNAs, and 1522 circRNAs were identified from 10 individuals containing different volumes of wood. Four possible regulators, comprising three lncRNAs, one circRNA, and eleven key miRNAs, were identified from the regulatory networks of lncRNA-miRNA-mRNA and circRNA-miRNA-mRNA to supply information on ncRNAs. Several candidate genes involved in phenylpropane and cellulose biosynthesis pathways, including , , and , and transcription factors, including (), (), (), and , were identified to reveal the molecular regulatory mechanisms regulating the growth traits of . The results not merely provide candidate functional genes related to growth trait and will be useful to carry out molecular breeding, but the strategy and method also provide scientists with an effective approach to revealing mechanisms behind important economic traits in other species.
是一种珍贵的木材和耐火树种,广泛分布于中国南方。目前,关于其生长特性的知识很少,特别是在分子育种方面。缺乏相关信息已经延缓了现代育种的发展。本研究旨在通过全转录组测序鉴定可能与生长相关的功能基因。在这项研究中,从 10 个个体中总共鉴定出 32711 条 mRNAs、525 条 miRNAs、54312 条 lncRNAs 和 1522 条 circRNAs,这些个体的木材体积不同。从 lncRNA-miRNA-mRNA 和 circRNA-miRNA-mRNA 的调控网络中鉴定出四个可能的调控因子,包括三个 lncRNA、一个 circRNA 和十一个关键 miRNA,为 ncRNAs 提供信息。鉴定出参与苯丙烷和纤维素生物合成途径的几个候选基因,包括 、 、 、 ,以及转录因子,包括 ()、 ()、 ()和 ,以揭示调节 生长特性的分子调控机制。这些结果不仅提供了与 生长特性相关的候选功能基因,将有助于开展分子育种,而且该策略和方法还为科学家揭示其他物种重要经济特性背后的机制提供了一种有效途径。