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筛查罕见的线粒体基因组变异揭示了 和 基因与糖尿病表型之间的潜在新关联。

Screening for Rare Mitochondrial Genome Variants Reveals a Potentially Novel Association between and Genes and Diabetes Phenotype.

机构信息

Department of Clinical Genetics, Medical University of Lodz, Pomorska 251, 92-213 Lodz, Poland.

Department of General Biophysics, Institute of Biophysics, University of Lodz, Pomorska 141/143, 90-236 Lodz, Poland.

出版信息

Int J Mol Sci. 2024 Feb 19;25(4):2438. doi: 10.3390/ijms25042438.

DOI:10.3390/ijms25042438
PMID:38397113
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10889583/
Abstract

Variations in several nuclear genes predisposing humans to the development of MODY diabetes have been very well characterized by modern genetic diagnostics. However, recent reports indicate that variants in the mtDNA genome may also be associated with the diabetic phenotype. As relatively little research has addressed the entire mitochondrial genome in this regard, the aim of the present study is to evaluate the genetic variations present in mtDNA among individuals susceptible to MODY diabetes. In total, 193 patients with a MODY phenotype were tested with a custom panel with mtDNA enrichment. Heteroplasmic variants were selected for further analysis via further sequencing based on long-range PCR to evaluate the potential contribution of frequent NUMTs (acronym for nuclear mitochondrial DNA) insertions. Twelve extremely rare variants with a potential damaging character were selected, three of which were likely to be the result of NUMTs from the nuclear genome. The variant m.3243A>G in was responsible for 3.5% of MODY cases in our study group. In addition, a novel, rare, and possibly pathogenic leucine variant m.12278T>C was found in . Our findings also found the gene to be over-represented in the study group, with a clear phenotype-genotype correlation observed in one family. Our data suggest that heteroplasmic variants in and genes may play a role in the pathophysiology of glucose metabolism in humans.

摘要

通过现代遗传诊断,几种导致 MODY 糖尿病发生的核基因变异已得到很好的描述。然而,最近的报告表明,线粒体基因组中的变异也可能与糖尿病表型有关。由于在这方面相对较少的研究涉及整个线粒体基因组,本研究旨在评估易患 MODY 糖尿病个体中线粒体 DNA 中的遗传变异。共有 193 名具有 MODY 表型的患者接受了 mtDNA 富集的定制面板检测。通过长距离 PCR 进一步测序选择异质体变体进行进一步分析,以评估频繁 NUMTs(核线粒体 DNA 的缩写)插入的潜在贡献。选择了 12 个具有潜在破坏性特征的极其罕见的变体,其中三个可能是来自核基因组的 NUMTs 的结果。变体 m.3243A>G 在我们的研究组中占 MODY 病例的 3.5%。此外,在 中发现了一种新的、罕见的、可能具有致病性的亮氨酸变体 m.12278T>C。我们的研究还发现, 基因在研究组中过度表达,在一个家族中观察到明显的表型-基因型相关性。我们的数据表明, 基因和 基因中的异质体变异可能在人类葡萄糖代谢的病理生理学中发挥作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2f37/10889583/aec2080b2bb4/ijms-25-02438-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2f37/10889583/09a1d9785859/ijms-25-02438-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2f37/10889583/aec2080b2bb4/ijms-25-02438-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2f37/10889583/09a1d9785859/ijms-25-02438-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2f37/10889583/aec2080b2bb4/ijms-25-02438-g002.jpg

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