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免疫反应相关基因在主动脉夹层与主动脉瘤中的特征比较。

Immune Response Associated Gene Signatures in Aortic Dissection Compared to Aortic Aneurysm.

机构信息

Division of Pathophysiology, Institute of Physiology and Pathophysiology, Medical Faculty, Johannes Kepler University Linz, 4020 Linz, Austria.

Experimental Gynaecology, Obstetrics and Gynaecological Endocrinology, Kepler University Hospital Linz, Johannes Kepler University Linz, 4020 Linz, Austria.

出版信息

Front Biosci (Landmark Ed). 2024 Feb 6;29(2):64. doi: 10.31083/j.fbl2902064.

Abstract

BACKGROUND

Thoracic aortic dissections (TAD) are life-threatening events mostly requiring immediate surgical treatment. Although dissections mainly occur independently of thoracic aortic aneurysms (TAA), both share a high comorbidity. There are several indications for an involvement of the immune system in the development of TAD, just as in TAA. Nevertheless, specific disease-relevant genes, biomolecular processes, and immune-specific phenotypes remain unknown.

METHODS

RNA from isolated aortic smooth muscle cells from TAD (n = 4), TAA (n = 3), and control patients were analyzed using microarray-based technologies. Additionally, three publicly available bulk RNA-seq studies of TAD (n = 23) and controls (n = 17) and one single-cell RNA-seq study of TAA (n = 8) and controls (n = 3) were analyzed. Differentially expressed genes were identified and used to identify affected pathways in TAD. Five selected genes were validated by quantitative real-time polymerase chain reaction (PCR).

RESULTS

We identified 37 genes that were significantly dysregulated in at least three TAD studies-24 of them were not shown to be associated with TAD, yet. Gene ontology analysis showed that immune response was significantly affected. Five of the genes (, , , , and ) were revealed as core genes that affect immune response in TAD. We compared the gene expression of those genes to TAA and found that , and potentially also were upregulated in TAD.

CONCLUSIONS

The identified immune-related genes showed TAD-specificity, independent of possible pre-existing comorbidities like TAA. So, these genes represent potential biomarkers and therapeutic targets linked to the immune response in acute TAD. Additionally, we identified a set of differentially expressed genes that represents a resource for further studies.

摘要

背景

胸主动脉夹层(TAD)是危及生命的事件,主要需要立即手术治疗。尽管夹层主要独立于胸主动脉瘤(TAA)发生,但两者都具有很高的共病率。有几个迹象表明免疫系统参与 TAD 的发展,就像在 TAA 中一样。然而,特定的疾病相关基因、生物分子过程和免疫特异性表型仍然未知。

方法

使用基于微阵列的技术分析来自 TAD(n=4)、TAA(n=3)和对照患者的分离的主动脉平滑肌细胞中的 RNA。此外,还分析了三个公开的 TAD(n=23)和对照(n=17)的批量 RNA-seq 研究以及一个 TAA(n=8)和对照(n=3)的单细胞 RNA-seq 研究。鉴定差异表达基因,并用于鉴定 TAD 中受影响的途径。通过定量实时聚合酶链反应(PCR)验证了五个选定基因。

结果

我们鉴定了 37 个在至少三个 TAD 研究中显著失调的基因-其中 24 个尚未与 TAD 相关。基因本体分析表明,免疫反应受到显著影响。其中 5 个基因(、、、和)被揭示为影响 TAD 中免疫反应的核心基因。我们将这些基因的表达与 TAA 进行比较,发现、和可能还有在 TAD 中上调。

结论

鉴定的免疫相关基因表现出 TAD 的特异性,独立于可能存在的 TAA 等先前存在的共病。因此,这些基因代表了与急性 TAD 中免疫反应相关的潜在生物标志物和治疗靶点。此外,我们鉴定了一组差异表达的基因,它们代表了进一步研究的资源。

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