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总准稳态近似的不合理有效性及其局限性。

The unreasonable effectiveness of the total quasi-steady state approximation, and its limitations.

机构信息

Mathematical Reviews, American Mathematical Society, 416 4th Street Ann Arbor, MI, 48103, United States of America.

Department of Biological Sciences and Department of Applied and Computational Mathematics and Statistics, University of Notre Dame, Notre Dame, IN 46556, United States of America.

出版信息

J Theor Biol. 2024 Apr 21;583:111770. doi: 10.1016/j.jtbi.2024.111770. Epub 2024 Feb 27.

Abstract

In this note, we discuss the range of parameters for which the total quasi-steady-state approximation of the Michaelis-Menten reaction mechanism holds validity. We challenge the prevalent notion that total quasi-steady-state approximation is "roughly valid" across all parameters, showing that its validity cannot be assumed, even roughly, across the entire parameter space - when the initial substrate concentration is high. On the positive side, we show that the linearized one-dimensional equation for total substrate is a valid approximation when the initial reduced substrate concentration s/K is small. Moreover, we obtain a precise picture of the long-term time course of both substrate and complex.

摘要

在本说明中,我们讨论了米氏酶反应机制的全准稳态近似有效范围的参数。我们挑战了总准稳态近似在所有参数下“大致有效”的普遍观点,表明即使在初始底物浓度较高时,也不能大致假定其在整个参数空间内有效。从积极的方面来看,我们表明当初始还原底物浓度 s/K 较小时,总底物的线性一维方程是一个有效的近似。此外,我们还获得了底物和复合物的长期时间过程的精确图像。

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