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探讨脆弱指数与银屑病因果关系的孟德尔随机化研究。

Exploration of the causality of frailty index on psoriasis: A Mendelian randomization study.

机构信息

Department of Dermatology, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.

Department of Infectious Diseases, The Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.

出版信息

Skin Res Technol. 2024 Mar;30(3):e13641. doi: 10.1111/srt.13641.

Abstract

BACKGROUND

Frailty is associated with a variety of diseases, but the relationship between frailty and psoriasis remains unclear.

METHODS

First, we conducted a two-sample Mendelian randomization based on genome-wide association studies (GWAS) to investigate genetic causality between frailty index and common diseases in dermatology. Inverse variance weighted was used to estimate causality. Second, expression quantitative trait locus (eQTLs) analysis was conducted to identify the genes affected by Single nucleotide polymorphisms (SNPs). Third, we performed function and pathway enrichment, transcriptome-wide association studies (TWAS) analysis based on eQTLs.

RESULTS

It was shown that the rise of frailty index could increase the risk of psoriasis (IVW, beta = 0.916, OR = 2.500, 95%CI:1.418-4.408, p = 0.002) through Mendelian randomization (MR), and there was no heterogeneity and pleiotropy. There was no causality between the frailty index and other common diseases in dermatology. We found 31 eQTLs based on strongly correlated SNPs in the causality. TWAS analysis found that the expressions of four genes were closely related to psoriasis, including HLA-DQA1, HLA-DQA2, HLA-DRB1 and HLA-DQB1.

CONCLUSION

It suggested that the frailty index had a significant positive causality on the risk of psoriasis, which was well documented by combined genomic, transcriptome, and proteome analyses.

摘要

背景

衰弱与多种疾病有关,但衰弱与银屑病之间的关系尚不清楚。

方法

首先,我们进行了基于全基因组关联研究(GWAS)的两样本孟德尔随机化,以研究衰弱指数与皮肤病学常见疾病之间的遗传因果关系。采用逆方差加权法估计因果关系。其次,进行了表达数量性状基因座(eQTL)分析,以鉴定受单核苷酸多态性(SNP)影响的基因。第三,我们进行了功能和途径富集分析,基于 eQTLs 的转录组全关联研究(TWAS)分析。

结果

孟德尔随机化结果表明,衰弱指数的升高会增加银屑病的发病风险(IVW,β=0.916,OR=2.500,95%CI:1.418-4.408,p=0.002),且无异质性和多效性。衰弱指数与皮肤病学中的其他常见疾病之间无因果关系。我们在因果关系中发现了 31 个基于强相关 SNP 的 eQTL。TWAS 分析发现,四个基因的表达与银屑病密切相关,包括 HLA-DQA1、HLA-DQA2、HLA-DRB1 和 HLA-DQB1。

结论

综合基因组、转录组和蛋白质组分析表明,衰弱指数与银屑病的发病风险呈显著正相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e436/10905529/5202e995932b/SRT-30-e13641-g004.jpg

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