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利用基于DNA的稳定同位素探测法鉴定降解吸附在聚苯乙烯纳米塑料上菲的细菌群落。

Identification of the bacterial community that degrades phenanthrene sorbed to polystyrene nanoplastics using DNA-based stable isotope probing.

作者信息

Summers Stephen, Bin-Hudari Mohammad Sufian, Magill Clayton, Henry Theodore, Gutierrez Tony

机构信息

Institute of Mechanical, Process and Energy Engineering (IMPEE), School of Engineering and Physical Sciences, Heriot-Watt University, Edinburgh, EH14 4AS, UK.

Singapore Centre for Environmental Life Sciences Engineering, Life Sciences Institute, National University of Singapore, Singapore, 119077, Singapore.

出版信息

Sci Rep. 2024 Mar 4;14(1):5229. doi: 10.1038/s41598-024-55825-9.

Abstract

In the Anthropocene, plastic pollution has become a new environmental biotope, the so-called plastisphere. In the oceans, nano- and micro-sized plastics are omnipresent and found in huge quantities throughout the water column and sediment, and their large surface area-to-volume ratio offers an excellent surface to which hydrophobic chemical pollutants (e.g. petrochemicals and POPs) can readily sorb to. Our understanding of the microbial communities that breakdown plastic-sorbed chemical pollutants, however, remains poor. Here, we investigated the formation of 500 nm and 1000 nm polystyrene (PS) agglomerations in natural seawater from a coastal environment, and we applied DNA-based stable isotope probing (DNA-SIP) with the 500 nm PS sorbed with isotopically-labelled phenanthrene to identify the bacterial members in the seawater community capable of degrading the hydrocarbon. Whilst we observed no significant impact of nanoplastic size on the microbial communities associated with agglomerates that formed in these experiments, these communities were, however, significantly different to those in the surrounding seawater. By DNA-SIP, we identified Arcobacteraceae, Brevundimonas, Comamonas, uncultured Comamonadaceae, Delftia, Sphingomonas and Staphylococcus, as well as the first member of the genera Acidiphilum and Pelomonas to degrade phenanthrene, and of the genera Aquabacterium, Paracoccus and Polymorphobacter to degrade a hydrocarbon. This work provides new information that feeds into our growing understanding on the fate of co-pollutants associated with nano- and microplastics in the ocean.

摘要

在人类世,塑料污染已成为一种新的环境生物群落,即所谓的塑料圈。在海洋中,纳米级和微米级塑料无处不在,在整个水柱和沉积物中大量存在,其巨大的表面积与体积比为疏水性化学污染物(如石化产品和持久性有机污染物)提供了一个极易吸附的表面。然而,我们对分解吸附在塑料上的化学污染物的微生物群落仍知之甚少。在此,我们研究了来自沿海环境的天然海水中500纳米和1000纳米聚苯乙烯(PS)团聚体的形成,并对吸附了同位素标记菲的500纳米PS应用基于DNA的稳定同位素探测(DNA-SIP),以识别海水中能够降解该碳氢化合物的细菌成员。虽然我们观察到纳米塑料尺寸对这些实验中形成的团聚体相关微生物群落没有显著影响,但这些群落与周围海水中的群落明显不同。通过DNA-SIP,我们鉴定出了嗜盐碱杆菌科、短波单胞菌属、丛毛单胞菌属、未培养的丛毛单胞菌科、代尔夫特菌属、鞘氨醇单胞菌属和葡萄球菌属,以及嗜酸菌属和佩洛莫菌属中第一个降解菲的成员,还有水生杆菌属、副球菌属和多形杆菌属中降解碳氢化合物的成员。这项工作提供了新的信息,有助于我们进一步了解海洋中与纳米和微塑料相关的共污染物的归宿。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0989/10909871/a532996637ec/41598_2024_55825_Fig1_HTML.jpg

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