Wei Yu, Qi Feng-Na, Xu Yan-Rui, Zhang Ke-Qin, Xu Jianping, Cao Yan-Ru, Liang Lian-Ming
State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan University, Kunming, China.
Department of Biology, McMaster University, Hamilton, ON, Canada.
Front Microbiol. 2024 Feb 15;15:1352989. doi: 10.3389/fmicb.2024.1352989. eCollection 2024.
is an important biocontrol agent against plant-parasitic nematodes, primarily infecting them with conidia. However, research on the regulatory genes and pathways involved in its conidiation is still limited. In this study, we employed -mediated genetic transformation to generate 4,870 random T-DNA insertion mutants of . Among these mutants, 131 strains exhibited abnormal conidiation, and further in-depth investigations were conducted on two strains (designated as #5-197 and #5-119) that showed significantly reduced conidiation. Through whole-genome re-sequencing and genome walking, we identified the T-DNA insertion sites in these strains and determined the corresponding genes affected by the insertions, namely and . Both genes were knocked out through homologous recombination, and phenotypic analysis revealed a significant difference in conidiation between the knockout strains and the wild-type strain (). Upon complementation of the Δ strain with the corresponding wildtype allele, conidiation was restored to a level comparable to , providing further evidence of the involvement of this gene in conidiation regulation in . The knockout of or reduced the antioxidant capacity of , and the absence of also resulted in decreased resistance to SDS, suggesting that this gene may be involved in the integrity of the cell wall. RT-qPCR showed that knockout of or altered expression levels of several known genes associated with conidiation. Additionally, the analysis of nematode infection assays with indicated that the knockout of and indirectly reduced the pathogenicity of towards the nematodes. The results demonstrate that - mediated T-DNA insertion mutagenesis, gene knockout, and complementation can be highly effective for identifying functionally important genes in .
是一种针对植物寄生线虫的重要生物防治剂,主要通过分生孢子感染它们。然而,关于其分生孢子形成所涉及的调控基因和途径的研究仍然有限。在本研究中,我们采用介导的遗传转化来产生4870个随机的T-DNA插入突变体。在这些突变体中,131个菌株表现出异常的分生孢子形成,并且对两个分生孢子形成显著减少的菌株(命名为#5-197和#5-119)进行了进一步深入研究。通过全基因组重测序和基因组步移,我们确定了这些菌株中的T-DNA插入位点,并确定了受插入影响的相应基因,即和。通过同源重组敲除了这两个基因,表型分析显示敲除菌株和野生型菌株()在分生孢子形成方面存在显著差异。用相应的野生型等位基因对Δ菌株进行互补后,分生孢子形成恢复到与相当的水平,这进一步证明了该基因参与了的分生孢子形成调控。敲除或降低了的抗氧化能力,并且缺失还导致对SDS的抗性降低,表明该基因可能参与细胞壁的完整性。RT-qPCR表明,敲除或改变了几个与分生孢子形成相关的已知基因的表达水平。此外,对线虫感染试验的分析表明,敲除和间接降低了对 nematodes的致病性。结果表明,介导的T-DNA插入诱变、基因敲除和互补对于鉴定中的功能重要基因非常有效。