Traditional Chinese Medicine Department, The Second Affiliated Hospital of Fujian Medical University, No. 34, North Zhongshan Road, Quanzhou, 362000, China.
Pathology Department, The Second Affiliated Hospital of Fujian Medical University, Quanzhou, 362000, China.
J Membr Biol. 2024 Apr;257(1-2):63-78. doi: 10.1007/s00232-024-00308-1. Epub 2024 Mar 5.
As one of the most prevalent malignancies among women, breast cancer (BC) is tightly linked to metabolic dysfunction. However, the correlation between mitochondrial metabolism-related genes (MMRGs) and BC remains unclear. The training and validation datasets for BC were obtained from The Cancer Genome Atlas and Gene Expression Omnibus databases, respectively. MMRG-related data were obtained from the Molecular Signatures Database. A risk score prognostic model incorporating MMRGs was established based on univariate, LASSO, and multivariate Cox regression analyses. Independent factors affecting BC prognosis were identified through regression analysis and presented in a nomogram. Single-sample gene set enrichment analysis was employed to assess the immune levels of high-risk (HR) and low-risk (LR) groups. The sensitivity of BC patients in the two groups to common anti-tumor drugs was evaluated by utilizing the Genomics of Drug Sensitivity in Cancer database. 12 MMRGs significantly associated with survival were selected from 1234 MMRGs. A 12-gene risk score prognostic model was built. In the multivariate regression analysis incorporating classical clinical factors, the MMRG-related risk score remained an independent prognostic factor. As revealed by tumor immune microenvironment analysis, the LR group with higher survival rates had elevated immune levels. The drug sensitivity results unmasked that the LR group demonstrated higher sensitivity to Irinotecan, Nilotinib, and Oxaliplatin, while the HR group demonstrated higher sensitivity to Lapatinib. The development of MMRG characteristics provides a comprehensive understanding of mitochondrial metabolism in BC, aiding in the prediction of prognosis and tumor microenvironment, and offering promising therapeutic choices for BC patients with different MMRG risk scores.
作为女性中最常见的恶性肿瘤之一,乳腺癌 (BC) 与代谢功能障碍密切相关。然而,线粒体代谢相关基因 (MMRGs) 与 BC 之间的相关性尚不清楚。BC 的训练和验证数据集分别来自癌症基因组图谱和基因表达综合数据库。MMRG 相关数据来自分子特征数据库。基于单变量、LASSO 和多变量 Cox 回归分析,建立了包含 MMRGs 的风险评分预后模型。通过回归分析确定影响 BC 预后的独立因素,并以列线图呈现。采用单样本基因集富集分析评估高风险 (HR) 和低风险 (LR) 组的免疫水平。利用癌症基因组药物敏感性数据库评估两组 BC 患者对常见抗肿瘤药物的敏感性。从 1234 个 MMRGs 中筛选出 12 个与生存显著相关的 MMRGs,构建了一个 12 基因风险评分预后模型。在包含经典临床因素的多变量回归分析中,MMRG 相关风险评分仍然是一个独立的预后因素。通过肿瘤免疫微环境分析显示,具有更高生存率的 LR 组具有更高的免疫水平。药物敏感性结果揭示,LR 组对伊立替康、尼罗替尼和奥沙利铂的敏感性更高,而 HR 组对拉帕替尼的敏感性更高。MMRG 特征的发展提供了对乳腺癌中线粒体代谢的全面理解,有助于预测预后和肿瘤微环境,并为具有不同 MMRG 风险评分的 BC 患者提供有前途的治疗选择。