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基于形态学的牡蛎物种鉴定的几何形态测量方法。

Geometric morphometric methods for identification of oyster species based on morphology.

作者信息

Liu Qian, Guo Yuepeng, Yang Yanzhuo, Mao Junxia, Wang Xubo, Liu Haijiao, Tian Ying, Hao Zhenlin

机构信息

Dalian Ocean University, Dalian, China Dalian Ocean University Dalian China.

Dalian Changhaiyide Aquaculture Company,Dalian,China, Dalian, China Dalian Changhaiyide Aquaculture Company,Dalian,China Dalian China.

出版信息

Biodivers Data J. 2024 Feb 26;12:e115019. doi: 10.3897/BDJ.12.e115019. eCollection 2024.

Abstract

Both genetic and environmental factors affect the morphology of oysters. Molecular identification is currently the primary means of species identification, but it is inconvenient and costly. In this research, we evaluated the effectiveness of geometric morphometric (GM) techniques in distinguishing between two oyster species, and . We used traditional morphometric and GM methods, including principal component analysis (PCA), thin-plate spline analysis (TPS) and canonical variable analysis (CVA), to identify specific features that distinguish the two species. We found that differences in shape can be visualised using GM methods. The Procrustes analysis revealed significant differences in shell morphology between and . The shells of are more prominent at the widest point and are more scattered and have a greater variety of shapes. The shells of are more oval in shape. PCA results indicated that PC1 explained 45.22%, PC2 explained 22.09% and PC3 explained 10.98% of the variation between the two species, which suggests that the main morphological differences are concentrated in these three principal components. Combining the TPS analysis function plots showed that the shell shape of is mainly elongated and spindle-shaped, whereas the shell shape of is more oval. The CVA results showed that the classification rate for the two species reached 100% which means that and have distinct differences in shell morphology and can be completely separated, based on morphological characteristics. Through these methods, a more comprehensive understanding of the morphological characteristics of different oyster populations can be obtained, providing a reference for oyster classification and identification.

摘要

遗传因素和环境因素都会影响牡蛎的形态。分子鉴定是目前物种鉴定的主要手段,但它既不方便又成本高昂。在本研究中,我们评估了几何形态测量(GM)技术在区分两种牡蛎物种[物种名称1]和[物种名称2]时的有效性。我们使用了传统形态测量法和GM方法,包括主成分分析(PCA)、薄板样条分析(TPS)和典型变量分析(CVA),来识别区分这两个物种的特定特征。我们发现,使用GM方法可以直观呈现形状差异。普氏分析揭示了[物种名称1]和[物种名称2]之间壳形态的显著差异。[物种名称1]的壳在最宽处更为突出,分布更分散且形状种类更多。[物种名称2]的壳形状更接近椭圆形。PCA结果表明,PC1解释了两个物种间45.22%的变异,PC2解释了22.09%,PC3解释了10.98%,这表明主要形态差异集中在这三个主成分中。结合TPS分析功能图显示,[物种名称1]的壳形状主要为细长的纺锤形,而[物种名称2]的壳形状更接近椭圆形。CVA结果表明,两个物种的分类率达到100%,这意味着[物种名称1]和[物种名称2]在壳形态上有明显差异,基于形态特征可以完全区分开。通过这些方法,可以更全面地了解不同牡蛎种群的形态特征,为牡蛎分类和鉴定提供参考。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1722/10913018/908c584cabf4/bdj-12-e115019-g001.jpg

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