• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

开发两种用于鉴定属的新型物种特异性引物,重点关注[具体物种1]和[具体物种2]。

The development of two novel species-specific primers for identifying genus , with focus on and .

作者信息

Wang Taoni, Quan Weiming, Cheng Qiqun, Fan RuiLang

机构信息

Key Laboratory of Oceanic and Polar Fisheries, Ministry of Agriculture, East China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Shanghai, China.

College of Fisheries and Life Science, Shanghai Ocean University, Shanghai, China.

出版信息

Mitochondrial DNA B Resour. 2018 Aug 27;3(2):892-895. doi: 10.1080/23802359.2018.1501299.

DOI:10.1080/23802359.2018.1501299
PMID:33474356
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7800477/
Abstract

Oyster reefs have important ecological functions and environmental service values, such as filtering water, providing fish habitats, maintaining biodiversity, and carbon sequestration. Oyster reef recovery has become one of the most important means for fishery resource conservation and ecosystems restoration of coastal regions and are two important reef oysters along the coast of China. However, it is very difficult to identify the larvae of these two oysters. To solve this problem, we developed two pairs of novel species-specific PCR primers for identifying these two oysters. The forward -specific primer is Cs-F: 5'-CGAAGAGGGGCATGATAAATGAGG-3', and the reverse primer is Cs-R: 5'-ATATGAACTTCTCCAACCTCCCC-3', both of them within the scope of mitochondrial ND5 gene. The forward -specific primer is Ca-F: 5'-GGGCAAATAAAAGGCAAAACCC-3', located between tRNA and tRNA, and the reverse primer is Ca-R: 5'-CATAAACTTCTGCAAGACTCCC-3', lies between tRNA and small subunit ribosomal RNA (ssrRNA). These two primers can identify the larvae of and from other oysters rapidly and effectively, with extremely high accurate rate (=100%). This molecular identification method does not require prior sorting of larvae. These two specific primers are good contribution to molecular identification of , and other oysters, and could be a useful tool for oyster larvae identification and ecological restoration.

摘要

牡蛎礁具有重要的生态功能和环境服务价值,如过滤水质、提供鱼类栖息地、维持生物多样性以及碳固存。牡蛎礁恢复已成为沿海地区渔业资源保护和生态系统恢复的最重要手段之一,[此处原文缺失两种牡蛎的具体名称]是中国沿海两种重要的礁牡蛎。然而,很难识别这两种牡蛎的幼虫。为了解决这个问题,我们开发了两对新型物种特异性PCR引物来识别这两种牡蛎。正向特异性引物为Cs-F:5'-CGAAGAGGGGCATGATAAATGAGG-3',反向引物为Cs-R:5'-ATATGAACTTCTCCAACCTCCCC-3',它们都在线粒体ND5基因范围内。正向特异性引物为Ca-F:5'-GGGCAAATAAAAGGCAAAACCC-3',位于tRNA和tRNA之间,反向引物为Ca-R:5'-CATAAACTTCTGCAAGACTCCC-3',位于tRNA和小亚基核糖体RNA(ssrRNA)之间。这两种引物能够快速、有效地从其他牡蛎中识别出[此处原文缺失两种牡蛎的具体名称]的幼虫,准确率极高(=100%)。这种分子鉴定方法不需要事先对幼虫进行分类。这两种特异性引物对[此处原文缺失两种牡蛎的具体名称]及其他牡蛎的分子鉴定有很大贡献,并且可能成为牡蛎幼虫鉴定和生态恢复的有用工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7477/7800477/8232a60d3888/TMDN_A_1501299_F0002_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7477/7800477/d6f210ea73d0/TMDN_A_1501299_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7477/7800477/8232a60d3888/TMDN_A_1501299_F0002_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7477/7800477/d6f210ea73d0/TMDN_A_1501299_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7477/7800477/8232a60d3888/TMDN_A_1501299_F0002_B.jpg

相似文献

1
The development of two novel species-specific primers for identifying genus , with focus on and .开发两种用于鉴定属的新型物种特异性引物,重点关注[具体物种1]和[具体物种2]。
Mitochondrial DNA B Resour. 2018 Aug 27;3(2):892-895. doi: 10.1080/23802359.2018.1501299.
2
When r-selection may not predict introduced-species proliferation: predation of a nonnative oyster.当r-选择可能无法预测外来物种的增殖时:一种非本地牡蛎的捕食情况
Ecol Appl. 2006 Apr;16(2):718-30. doi: 10.1890/1051-0761(2006)016[0718:wrmnpi]2.0.co;2.
3
Pathogens in Crassostrea ariakensis and other Asian oyster species: implications for non-native oyster introduction to Chesapeake Bay.长牡蛎及其他亚洲牡蛎品种中的病原体:非本地牡蛎引入切萨皮克湾的影响
Dis Aquat Organ. 2007 Oct 15;77(3):207-23. doi: 10.3354/dao01829.
4
Geographical distribution and ecological niche dynamics of Crassostrea sikamea (Amemiya, 1928) in China's coastal regions under climate change.中国沿海地区气候变化下的西施舌(Amemiya,1928)地理分布与生态位动态。
Sci Total Environ. 2024 Apr 10;920:171061. doi: 10.1016/j.scitotenv.2024.171061. Epub 2024 Feb 17.
5
SNP mining in Crassostrea gigas EST data: transferability to four other Crassostrea species, phylogenetic inferences and outlier SNPs under selection.太平洋牡蛎EST数据中的单核苷酸多态性挖掘:在其他四种牡蛎物种中的转移性、系统发育推断及选择下的异常单核苷酸多态性
PLoS One. 2014 Sep 19;9(9):e108256. doi: 10.1371/journal.pone.0108256. eCollection 2014.
6
Bioaccumulation, retention, and depuration of enteric viruses by Crassostrea virginica and Crassostrea ariakensis oysters.弗吉尼亚牡蛎和香港牡蛎对肠道病毒的生物累积、留存及净化
Appl Environ Microbiol. 2008 Nov;74(22):6825-31. doi: 10.1128/AEM.01000-08. Epub 2008 Sep 26.
7
Multiple genetic sources facilitate the northward range expansion of an intertidal oyster along China's coast.多种遗传来源促进了中国沿海潮间带牡蛎的向北分布扩张。
Ecol Appl. 2024 Jan;34(1):e2764. doi: 10.1002/eap.2764. Epub 2022 Dec 22.
8
Co-localized Crassostrea virginica and Crassostrea ariakensis oysters differ in bioaccumulation, retention and depuration of microbial indicators and human enteropathogens.同源的美洲帘蛤和日本囊对虾牡蛎在微生物指标和人类肠道病原体的生物积累、保留和净化方面存在差异。
J Appl Microbiol. 2010 Feb;108(2):736-44. doi: 10.1111/j.1365-2672.2009.04480.x. Epub 2009 Jul 20.
9
Molecular and histological identification of Marteilioides infection in Suminoe Oyster Crassostrea ariakensis, Manila Clam Ruditapes philippinarum and Pacific Oyster Crassostrea gigas on the south coast of Korea.韩国南部沿海地区的长牡蛎、菲律宾蛤仔和太平洋牡蛎中 Marteilioides 感染的分子和组织学鉴定。
J Invertebr Pathol. 2013 Nov;114(3):277-84. doi: 10.1016/j.jip.2013.08.008. Epub 2013 Sep 7.
10
Intraspecific Variation in Mitogenomes of Five Crassostrea Species Provides Insight into Oyster Diversification and Speciation.五种牡蛎线粒体基因组的种内变异为牡蛎的多样化和物种形成提供了见解。
Mar Biotechnol (NY). 2016 Apr;18(2):242-54. doi: 10.1007/s10126-016-9686-8. Epub 2016 Feb 4.

引用本文的文献

1
The development of multiplex PCR assays for the rapid identification of multiple Saccostrea species, and their practical applications in restoration and aquaculture.用于快速鉴定多种牡蛎物种的多重 PCR 检测方法的开发及其在修复和水产养殖中的实际应用。
BMC Ecol Evol. 2024 May 21;24(1):67. doi: 10.1186/s12862-024-02250-1.

本文引用的文献

1
Morphology of the larval shell of three oyster species of the genus Crassostrea Sacco, 1897 (Bivalvia: Ostreidae).1897年萨克科厚壳贻贝属(双壳纲:牡蛎科)三种牡蛎幼虫壳的形态学
Braz J Biol. 2010 Aug;70(3):645-50. doi: 10.1590/s1519-69842010000300023.
2
[Purification function and ecological services value of Crassostrea sp. in Yangtze River estuary].长江口缢蛏的净化功能与生态服务价值
Ying Yong Sheng Tai Xue Bao. 2007 Apr;18(4):871-6.
3
Specific detection of Pacific oyster (Crassostrea gigas) larvae in plankton samples using nested polymerase chain reaction.
利用巢式聚合酶链反应对浮游生物样本中的太平洋牡蛎(太平洋牡蛎)幼虫进行特异性检测。
Mar Biotechnol (NY). 2005 Jan-Feb;7(1):11-20. doi: 10.1007/s10126-004-0034-z. Epub 2005 Mar 15.
4
Genetic diversity and molecular markers of cupped oysters (genera Crassostrea, Caccostrea, and Striostrea) in Thailand revealed by randomly amplified polymorphic DNA analysis.泰国杯形牡蛎(巨蛎属、拟巨蛎属和纹蛎属)的遗传多样性及分子标记:随机扩增多态性DNA分析揭示
Mar Biotechnol (NY). 2001 Mar;3(2):133-44. doi: 10.1007/s101260000057.
5
Molecular genetic identification tools for three commercially cultured oysters (Crassostrea belcheri, Crassostrea iredalei, and Saccostrea cucullata) in Thailand.泰国三种商业养殖牡蛎(贝尔彻巨牡蛎、艾氏巨牡蛎和僧帽牡蛎)的分子遗传鉴定工具
Mar Biotechnol (NY). 2003 Jan-Feb;5(1):27-36. doi: 10.1007/s10126-002-0047-4.
6
Development of Species-Specific Markers of the Tropical Oyster (Crassostrea belcheri) in Thailand.泰国热带牡蛎(Crassostrea belcheri)物种特异性标记的开发。
Mar Biotechnol (NY). 2000 Sep;2(5):476-484. doi: 10.1007/s101260000028.
7
Discrimination between closely related Pacific oyster species (Crassostrea) via mitochondrial DNA sequences coding for large subunit rRNA.通过编码大亚基核糖体RNA的线粒体DNA序列区分亲缘关系相近的太平洋牡蛎物种(蚶属)
Mol Mar Biol Biotechnol. 1993 Jun;2(3):129-36.