绘制蛋白磷酸酶2A催化亚基PPP2CA的底物图谱。

Mapping the substrate landscape of protein phosphatase 2A catalytic subunit PPP2CA.

作者信息

Brewer Abigail, Sathe Gajanan, Pflug Billie E, Clarke Rosemary G, Macartney Thomas J, Sapkota Gopal P

机构信息

Medical Research Council (MRC) Protein Phosphorylation & Ubiquitylation Unit, School of Life Sciences, University of Dundee, Dundee DD1 5EH, UK.

出版信息

iScience. 2024 Feb 19;27(3):109302. doi: 10.1016/j.isci.2024.109302. eCollection 2024 Mar 15.

Abstract

Protein phosphatase 2A (PP2A) is an essential Ser/Thr phosphatase. The PP2A holoenzyme complex comprises a scaffolding (A), regulatory (B), and catalytic (C) subunit, with PPP2CA being the principal catalytic subunit. The full scope of PP2A substrates in cells remains to be defined. To address this, we employed dTAG proteolysis-targeting chimeras to efficiently and selectively degrade dTAG-PPP2CA in homozygous knock-in HEK293 cells. Unbiased global phospho-proteomics identified 2,204 proteins with significantly increased phosphorylation upon dTAG-PPP2CA degradation, implicating them as potential PPP2CA substrates. A vast majority of these are novel. Bioinformatic analyses revealed involvement of the potential PPP2CA substrates in spliceosome function, cell cycle, RNA transport, and ubiquitin-mediated proteolysis. We identify a pSP/pTP motif as a predominant target for PPP2CA and confirm some of our phospho-proteomic data with immunoblotting. We provide an in-depth atlas of potential PPP2CA substrates and establish targeted degradation as a robust tool to unveil phosphatase substrates in cells.

摘要

蛋白磷酸酶2A(PP2A)是一种重要的丝氨酸/苏氨酸磷酸酶。PP2A全酶复合物由一个支架(A)、调节(B)和催化(C)亚基组成,其中PPP2CA是主要的催化亚基。细胞中PP2A底物的全貌仍有待确定。为了解决这个问题,我们使用了dTAG蛋白酶靶向嵌合体,在纯合敲入HEK293细胞中高效且选择性地降解dTAG-PPP2CA。无偏倚的全磷酸化蛋白质组学鉴定出2204种蛋白质,在dTAG-PPP2CA降解后其磷酸化显著增加,表明它们可能是潜在的PPP2CA底物。其中绝大多数是新发现的。生物信息学分析表明,潜在的PPP2CA底物参与剪接体功能、细胞周期、RNA转运和泛素介导的蛋白水解。我们确定pSP/pTP基序是PPP2CA的主要作用靶点,并通过免疫印迹证实了我们的一些磷酸化蛋白质组学数据。我们提供了一份潜在PPP2CA底物的深入图谱,并将靶向降解确立为揭示细胞中磷酸酶底物的有力工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c24e/10915630/10c71598b5cb/fx1.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索