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ORTEGA v1.0:一个用于使用运动数据进行情境感知交互分析的开源Python包。

ORTEGA v1.0: an open-source Python package for context-aware interaction analysis using movement data.

作者信息

Su Rongxiang, Liu Yifei, Dodge Somayeh

机构信息

Department of Geography, University of California Santa Barbara, Santa Barbara, 93106, USA.

出版信息

Mov Ecol. 2024 Mar 9;12(1):20. doi: 10.1186/s40462-024-00460-2.

Abstract

BACKGROUND

Interaction analysis via movement in space and time contributes to understanding social relationships among individuals and their dynamics in ecological systems. While there is an exciting growth in research in computational methods for interaction analysis using movement data, there remain challenges regarding reproducibility and replicability of the existing approaches. The current movement interaction analysis tools are often less accessible or tested for broader use in ecological research.

RESULTS

To address these challenges, this paper presents ORTEGA, an Object-oRiented TimE-Geographic Analytical tool, as an open-source Python package for analyzing potential interactions between pairs of moving entities based on the observation of their movement. ORTEGA is developed based on one of the newly emerged time-geographic approaches for quantifying space-time interaction patterns among animals. A case study is presented to demonstrate and evaluate the functionalities of ORTEGA in tracing dynamic interaction patterns in animal movement data. Besides making the analytical code and data freely available to the community, the developed package also offers an extension of the existing theoretical development of ORTEGA for incorporating a context-aware ability to inform interaction analysis.

CONCLUSIONS

ORTEGA contributes two significant capabilities: (1) the functions to identify potential interactions (e.g., encounters, concurrent interactions, delayed interactions) from movement data of two or more entities using a time-geographic-based approach; and (2) the capacity to compute attributes of potential interaction events including start time, end time, interaction duration, and difference in movement parameters such as speed and moving direction, and also contextualize the identified potential interaction events.

摘要

背景

通过空间和时间中的运动进行交互分析,有助于理解个体之间的社会关系及其在生态系统中的动态变化。虽然利用运动数据进行交互分析的计算方法研究取得了令人兴奋的进展,但现有方法在可重复性和可复制性方面仍存在挑战。当前的运动交互分析工具通常难以获取,也未针对生态研究中的广泛应用进行测试。

结果

为应对这些挑战,本文介绍了ORTEGA,一种面向对象的时间地理分析工具,作为一个开源Python包,用于基于对移动实体运动的观察来分析成对移动实体之间的潜在交互。ORTEGA是基于一种新出现的时间地理方法开发的,用于量化动物之间的时空交互模式。本文通过一个案例研究来展示和评估ORTEGA在追踪动物运动数据中的动态交互模式方面的功能。除了向社区免费提供分析代码和数据外,开发的包还扩展了ORTEGA现有的理论发展,以纳入情境感知能力来为交互分析提供信息。

结论

ORTEGA具有两项重要功能:(1)使用基于时间地理的方法从两个或多个实体的运动数据中识别潜在交互(例如,相遇、并发交互、延迟交互)的功能;(2)计算潜在交互事件属性的能力,包括开始时间、结束时间、交互持续时间以及速度和移动方向等运动参数的差异,并对识别出的潜在交互事件进行情境化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6c23/10925014/0d7ac91dc3ff/40462_2024_460_Fig1_HTML.jpg

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