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向日葵基因家族的表征及对干旱和盐胁迫响应基因的鉴定。

Characterization of gene family and identification of genes response to drought and salt stress in sunflower.

作者信息

Wang Zhaoping, Zhou Jiayan, Zou Jian, Yang Jun, Chen Weiying

机构信息

China West Normal University, College of Life Sciences, Nanchong, Sichuan, China.

出版信息

PeerJ. 2024 Mar 7;12:e16831. doi: 10.7717/peerj.16831. eCollection 2024.

DOI:10.7717/peerj.16831
PMID:38464756
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10924776/
Abstract

In the context of global climate change, drought and soil salinity are some of the most devastating abiotic stresses affecting agriculture today. PYL proteins are essential components of abscisic acid (ABA) signaling and play critical roles in responding to abiotic stressors, including drought and salt stress. Although genes have been studied in many species, their roles in responding to abiotic stress are still unclear in the sunflower. In this study, 19 genes, distributed on 15 of 17 chromosomes, were identified in the sunflower. Fragment duplication is the main cause of the expansion of genes in the sunflower genome. Based on phylogenetic analysis, genes were divided into three subfamilies. Members in the same subfamily share similar protein motifs and gene exon-intron structures, except for the second subfamily. Tissue expression patterns suggested that s serve different functions when responding to developmental and environmental signals in the sunflower. Exogenous ABA treatment showed that most s respond to an increase in the ABA level. Among these s, , , , , , , and were up-regulated with PEG6000 treatment and NaCl treatment. This indicates that they may play a role in resisting drought and salt stress in the sunflower by mediating ABA signaling. Our findings provide some clues to further explore the functions of genes in the sunflower, especially with regards to drought and salt stress resistance.

摘要

在全球气候变化的背景下,干旱和土壤盐渍化是当今影响农业的一些最具破坏性的非生物胁迫。PYL蛋白是脱落酸(ABA)信号传导的重要组成部分,在应对包括干旱和盐胁迫在内的非生物胁迫中发挥关键作用。尽管在许多物种中都对这些基因进行了研究,但它们在向日葵中对非生物胁迫的响应作用仍不清楚。在本研究中,在向日葵中鉴定出了19个分布在17条染色体中的15条上的这些基因。片段重复是向日葵基因组中这些基因扩增的主要原因。基于系统发育分析,这些基因被分为三个亚家族。除了第二个亚家族外,同一亚家族的成员具有相似的蛋白质基序和基因外显子-内含子结构。组织表达模式表明,这些基因在向日葵响应发育和环境信号时发挥不同功能。外源ABA处理表明,大多数这些基因对ABA水平的升高有响应。在这些基因中,[具体基因名称]在PEG6000处理和NaCl处理下上调。这表明它们可能通过介导ABA信号传导在向日葵抵抗干旱和盐胁迫中发挥作用。我们的研究结果为进一步探索向日葵中这些基因的功能提供了一些线索,特别是在抗旱和抗盐胁迫方面。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edfe/10924776/f921ce6e1196/peerj-12-16831-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edfe/10924776/b2683a276701/peerj-12-16831-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edfe/10924776/df7526396c16/peerj-12-16831-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edfe/10924776/fb4b603a730c/peerj-12-16831-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edfe/10924776/d99931326057/peerj-12-16831-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edfe/10924776/2ea8e523fb4c/peerj-12-16831-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edfe/10924776/51f090537f3b/peerj-12-16831-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edfe/10924776/f0a2a926bed8/peerj-12-16831-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edfe/10924776/cebc14df7b69/peerj-12-16831-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edfe/10924776/f921ce6e1196/peerj-12-16831-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edfe/10924776/b2683a276701/peerj-12-16831-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edfe/10924776/df7526396c16/peerj-12-16831-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edfe/10924776/fb4b603a730c/peerj-12-16831-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edfe/10924776/d99931326057/peerj-12-16831-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edfe/10924776/2ea8e523fb4c/peerj-12-16831-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edfe/10924776/51f090537f3b/peerj-12-16831-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edfe/10924776/f0a2a926bed8/peerj-12-16831-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edfe/10924776/cebc14df7b69/peerj-12-16831-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edfe/10924776/f921ce6e1196/peerj-12-16831-g009.jpg

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