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[物种名称]中PYL基因家族的全基因组分析及其对非生物胁迫的响应

Genome-Wide Analysis of the PYL Gene Family in and Its Responses to Abiotic Stresses.

作者信息

Yu Jiajie, Wang Ruiqi, Zhang Xiang, Chen Su

机构信息

School of Agriculture, Liaodong University, Dandong 118003, China.

State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China.

出版信息

Int J Mol Sci. 2024 Dec 23;25(24):13728. doi: 10.3390/ijms252413728.

Abstract

Abscisic acid (ABA) is a key phytohormone that participates in various plant biological processes, such as seed germination, senescence, stomatal movement, and flowering. In the ABA signal transduction pathway, Pyrabactin Resistance 1 (PYR1)/PYR1-Like (PYL)/Regulatory Component is the core module for ABA perception. In this study, a total of 12 PYL family members were identified in birch ( Suk.) from a genome-wide range that can be divided into 3 subgroups according to their evolutionary relationships. The physiochemical properties of the 12 s were characterized, and the members of the same subgroups share more similar exon-intron and motif patterns. The results of synteny analysis showed two syntenic gene pairs within BpPYL family members and 12, 8, 19, and 6 syntenic gene pairs between s and s, s, s, and s, respectively. Multiple -acting elements were identified in the promoters of s, including stress response, phytohormone signaling, and growth and development. The results of GO and KEGG enrichment analysis showed that s were enriched in the pathways mainly related to ABA signaling and cell communication. The results of RT-qPCR verified the expressional responses of s to ABA, salt, and PEG treatments. Furthermore, the positive roles of and were proven by using salt-tolerant yeast transformation. This study provides a reference for research on ABA signal transduction and forest tree responses upon abiotic stresses.

摘要

脱落酸(ABA)是一种关键的植物激素,参与多种植物生物学过程,如种子萌发、衰老、气孔运动和开花。在ABA信号转导途径中,吡咯烷酮抗性1(PYR1)/类PYR1(PYL)/调节成分是ABA感知的核心模块。在本研究中,从全基因组范围内在桦树(Suk.)中鉴定出总共12个PYL家族成员,根据它们的进化关系可分为3个亚组。对这12个成员的理化性质进行了表征,同一亚组的成员具有更相似的外显子-内含子和基序模式。共线性分析结果显示,BpPYL家族成员中有2对共线性基因对,其与s、s、s和s之间分别有12、8、19和6对共线性基因对。在s的启动子中鉴定出多种作用元件,包括应激反应、植物激素信号传导以及生长和发育。GO和KEGG富集分析结果表明,s主要富集在与ABA信号传导和细胞通讯相关的途径中。RT-qPCR结果验证了s对ABA、盐和PEG处理的表达响应。此外,通过耐盐酵母转化证明了和的积极作用。本研究为ABA信号转导及林木对非生物胁迫响应的研究提供了参考。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9d0/11678367/c48b2135ae25/ijms-25-13728-g001.jpg

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