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解析癌症免疫中TREM2、HCST和TYROBP的分子及临床特征:一项全面的泛癌研究。

Deciphering the molecular and clinical characteristics of TREM2, HCST, and TYROBP in cancer immunity: A comprehensive pan-cancer study.

作者信息

Zheng Piao, Tan Yejun, Liu Qing, Wu Changwu, Kang Jing, Liang Shuzhi, Zhu Lemei, Yan Kuipo, Zeng Lingfeng, Chen Bolin

机构信息

Department of Integrated Traditional Chinese & Western Medicine, The Second Xiangya Hospital, Central South University, Changsha, Hunan, China.

School of Mathematics, University of Minnesota Twin Cities, Minneapolis, MN, United States.

出版信息

Heliyon. 2024 Feb 28;10(5):e26993. doi: 10.1016/j.heliyon.2024.e26993. eCollection 2024 Mar 15.

Abstract

BACKGROUND

Hematopoietic cell signal transducer (HCST) and tyrosine kinase-binding protein (TYROBP) are triggering receptors expressed on myeloid cells 2 (TREM2), which are pivotal in the immune response to disease. Despite growing evidence underscoring the significance of TREM2, HCST, and TYROBP in certain forms of tumorigenesis, a comprehensive pan-cancer analysis of these proteins is lacking.

METHODS

Multiple databases were synthesized to investigate the relationship between TREM2, HCST, TYROBP, and various cancer types. These include prognosis, methylation, regulation by long non-coding RNAs and transcription factors, immune signatures, pathway activity, microsatellite instability (MSI), tumor mutational burden (TMB), single-cell transcriptome profiling, and drug sensitivity.

RESULTS

TREM2, HCST, and TYROBP displayed extensive somatic changes across numerous tumors, and their mRNA expression and methylation levels influenced patient outcomes across multiple cancer types. long non-coding RNA (lncRNA) -messenger RNA (mRNA) and TF-mRNA regulatory networks involving TREM2, HCST, and TYROBP were identified, with lncRNA MEG3 and the transcription factor SIP1 emerging as potential key regulators. Further immune analyses indicated that TREM2, HCST, and TYROBP play critical roles in immune-related pathways and macrophage differentiation, and may be significantly associated with TGF-β and SMAD9. Furthermore, the expression of TREM2, HCST, and TYROBP correlated with the immunotherapy markers TMB and MSI, and influenced sensitivity to immune-targeted drugs, thereby indicating their potential as predictors of immunotherapy outcomes.

CONCLUSION

This study offers valuable insights into the roles of TREM2, HCST, and TYROBP in tumor immunotherapy, suggesting their potential as prognostic markers and therapeutic targets for various cancers.

摘要

背景

造血细胞信号转导器(HCST)和酪氨酸激酶结合蛋白(TYROBP)是髓系细胞2(TREM2)上表达的触发受体,在疾病免疫反应中起关键作用。尽管越来越多的证据强调了TREM2、HCST和TYROBP在某些肿瘤发生形式中的重要性,但缺乏对这些蛋白的全面泛癌分析。

方法

综合多个数据库来研究TREM2、HCST、TYROBP与各种癌症类型之间的关系。这些包括预后、甲基化、长链非编码RNA和转录因子的调控、免疫特征、通路活性、微卫星不稳定性(MSI)、肿瘤突变负担(TMB)、单细胞转录组分析以及药物敏感性。

结果

TREM2、HCST和TYROBP在众多肿瘤中显示出广泛的体细胞变化,它们的mRNA表达和甲基化水平影响了多种癌症类型患者的预后。鉴定出了涉及TREM2、HCST和TYROBP的长链非编码RNA(lncRNA)-信使RNA(mRNA)和转录因子- mRNA调控网络,lncRNA MEG3和转录因子SIP1成为潜在的关键调节因子。进一步的免疫分析表明,TREM2、HCST和TYROBP在免疫相关通路和巨噬细胞分化中起关键作用,可能与TGF-β和SMAD9显著相关。此外,TREM2、HCST和TYROBP的表达与免疫治疗标志物TMB和MSI相关,并影响对免疫靶向药物的敏感性,从而表明它们作为免疫治疗结果预测指标的潜力。

结论

本研究为TREM2、HCST和TYROBP在肿瘤免疫治疗中的作用提供了有价值的见解,表明它们作为各种癌症的预后标志物和治疗靶点的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8eda/10926084/751cfdb8cc91/gr1.jpg

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