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一种新型的 CD8+ T 细胞相关基因特征作为肝细胞癌的预后生物标志物。

A novel CD8+ T cell-related gene signature as a prognostic biomarker in hepatocellular carcinoma.

机构信息

School of Public Health & Laboratory Medicine, Hunan University of Medicine, Huaihua, China.

Hunan Provincial Key Laboratory for Synthetic Biology of Traditional Chinese Medicine, Hunan University of Medicine, Huaihua, China.

出版信息

Medicine (Baltimore). 2024 Mar 15;103(11):e37496. doi: 10.1097/MD.0000000000037496.

DOI:10.1097/MD.0000000000037496
PMID:38489709
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10939595/
Abstract

CD8+ T cells have great roles in tumor suppression and elimination of various tumors including hepatocellular carcinoma (HCC). Nonetheless, potential prognostic roles of CD8+ T cell-related genes (CD8Gs) in HCC remains unknown. In our study, 416 CD8Gs were identified in HCC, which were enriched in inflammatory and immune signaling pathways. Using The Cancer Genome Atlas dataset, a 5-CD8Gs risk model (KLRB1, FYN, IL2RG, FCER1G, and DGKZ) was constructed, which was verified in International Cancer Genome Consortium and gene expression omnibus datasets. Furthermore, we found that overall survival was independently correlated with the CD8Gs signature, and it was associated with immune- and cancer-related signaling pathways and immune cells infiltration. Finally, drug sensitivity data indicated that 10 chemotherapeutic drugs held promise as therapeutics for HCC patients with high-risk. In conclusion, multi-databases analysis showed that 5-CD8Gs and their signature could be an indicator to predict candidate drugs for HCC therapy.

摘要

CD8+ T 细胞在肿瘤抑制和消除包括肝细胞癌(HCC)在内的各种肿瘤方面发挥着重要作用。然而,CD8+ T 细胞相关基因(CD8Gs)在 HCC 中的潜在预后作用尚不清楚。在我们的研究中,在 HCC 中鉴定出 416 个 CD8Gs,它们富集在炎症和免疫信号通路中。使用癌症基因组图谱数据集,构建了一个 5-CD8Gs 风险模型(KLRB1、FYN、IL2RG、FCER1G 和 DGKZ),并在国际癌症基因组联盟和基因表达综合数据集得到验证。此外,我们发现总生存期与 CD8Gs 特征独立相关,与免疫和癌症相关的信号通路以及免疫细胞浸润有关。最后,药物敏感性数据表明,10 种化疗药物有望成为高危 HCC 患者的治疗药物。总之,多数据库分析表明,5-CD8Gs 及其特征可以作为预测 HCC 治疗候选药物的指标。

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本文引用的文献

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Identification and validation of hypoxia-derived gene signatures to predict clinical outcomes and therapeutic responses in stage I lung adenocarcinoma patients.鉴定和验证缺氧相关基因特征,以预测 I 期肺腺癌患者的临床结局和治疗反应。
Theranostics. 2021 Mar 5;11(10):5061-5076. doi: 10.7150/thno.56202. eCollection 2021.
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Prognostic and predictive value of FCER1G in glioma outcomes and response to immunotherapy.FCER1G在胶质瘤预后及免疫治疗反应中的预后和预测价值。
Cancer Cell Int. 2021 Feb 12;21(1):103. doi: 10.1186/s12935-021-01804-3.
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CD8 T cell states in human cancer: insights from single-cell analysis.
人类癌症中的 CD8 T 细胞状态:单细胞分析的见解。
Nat Rev Cancer. 2020 Apr;20(4):218-232. doi: 10.1038/s41568-019-0235-4. Epub 2020 Feb 5.
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Enhanced expression of FCER1G predicts positive prognosis in multiple myeloma.FCER1G的表达增强预示着多发性骨髓瘤的预后良好。
J Cancer. 2020 Jan 1;11(5):1182-1194. doi: 10.7150/jca.37313. eCollection 2020.
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Adv Immunol. 2019;144:217-245. doi: 10.1016/bs.ai.2019.08.004. Epub 2019 Sep 12.
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RNA-Seq analysis of peripheral blood mononuclear cells reveals unique transcriptional signatures associated with radiotherapy response of nasopharyngeal carcinoma and prognosis of head and neck cancer.外周血单个核细胞的 RNA-Seq 分析揭示了与鼻咽癌放疗反应和头颈部癌症预后相关的独特转录特征。
Cancer Biol Ther. 2020;21(2):139-146. doi: 10.1080/15384047.2019.1670521. Epub 2019 Nov 7.
7
Blockade of β-Adrenergic Receptors Improves CD8 T-cell Priming and Cancer Vaccine Efficacy.β-肾上腺素受体阻断可改善 CD8 T 细胞的初始激活和癌症疫苗的疗效。
Cancer Immunol Res. 2019 Nov;7(11):1849-1863. doi: 10.1158/2326-6066.CIR-18-0833. Epub 2019 Sep 16.
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J Oncol. 2019 Feb 28;2019:4508794. doi: 10.1155/2019/4508794. eCollection 2019.
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