Department of Biology, Faculty of Science, Shahrekord University, Shahrekord, P. O. Box.115, Iran; Central Laboratory, Shahrekord University, Shahrekord, Iran.
Department of Biology, Faculty of Science, Shahrekord University, Shahrekord, P. O. Box.115, Iran; Central Laboratory, Shahrekord University, Shahrekord, Iran.
Chemosphere. 2024 May;355:141724. doi: 10.1016/j.chemosphere.2024.141724. Epub 2024 Mar 16.
The pervasive use of pesticides like chlorpyrifos (CPY) has been associated with deleterious effects on biomolecules, posing significant risks to environmental integrity, public health, and overall ecosystem equilibrium. Accordingly, in this study, we investigated the potential binding interaction between the well-conserved enzyme, lysozyme (LSZ), and CPY through various spectroscopic techniques and molecular modeling. The UV-vis absorption and fluorescence experiments confirmed the complex formation and static quenching of the intrinsic fluorescence intensity. LSZ revealed a singular binding site for CPY, with binding constants around 10 M across different temperature ranges. Analysis of thermodynamic parameters showed the spontaneous nature of the complexation process, while also revealing the pivotal role of hydrophobic interactions in stabilizing the LSZ-CPY system. According to circular dichroism and Fourier transform infrared studies, CPY binding changed the secondary structure of LSZ by boosting α-helix presence and reducing the levels of β-sheet and β-turn content. Further, CPY decreased the stability and activity of LSZ. Computational docking delineated the specific and highly preferred binding site of CPY within the structure of LSZ. Molecular dynamic simulation indicated the enduring stability of the LSZ/CPY complex and revealed structural modifications in the LSZ after binding with CPY. This research provides a detailed understanding of the intermolecular dynamics between CPY and LSZ, concurrently elucidating the molecular-level implications for the potential hazards of pesticides in the natural environment.
拟除虫菊酯等农药的广泛使用与生物分子的有害影响有关,对环境完整性、公共健康和整个生态系统平衡构成重大风险。因此,在这项研究中,我们通过各种光谱技术和分子建模研究了保守酶溶菌酶(LSZ)与 CPY 之间的潜在结合相互作用。紫外可见吸收和荧光实验证实了复合物的形成和固有荧光强度的静态猝灭。LSZ 为 CPY 呈现出单一的结合位点,在不同温度范围内的结合常数约为 10 M。热力学参数分析表明了配合物形成过程的自发性,同时还揭示了疏水相互作用在稳定 LSZ-CPY 系统中的关键作用。根据圆二色性和傅里叶变换红外研究,CPY 结合通过增加α-螺旋的存在和降低β-折叠和β-转角含量来改变 LSZ 的二级结构。此外,CPY 降低了 LSZ 的稳定性和活性。计算对接描绘了 CPY 在 LSZ 结构中的特定和高度优先的结合位点。分子动力学模拟表明 LSZ/CPY 复合物具有持久的稳定性,并揭示了 LSZ 与 CPY 结合后结构的变化。这项研究提供了对 CPY 和 LSZ 之间分子间动力学的详细了解,同时阐明了农药在自然环境中潜在危害的分子水平影响。