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全基因组正向遗传筛选以鉴定介导纳米颗粒摄取和细胞内处理的受体和蛋白质。

Genome-wide forward genetic screening to identify receptors and proteins mediating nanoparticle uptake and intracellular processing.

机构信息

Department of Nanomedicine & Drug Targeting, Groningen Research Institute of Pharmacy (GRIP), University of Groningen, Groningen, The Netherlands.

Department of Pharmaceutical Analysis, Groningen Research Institute of Pharmacy (GRIP), University of Groningen, Groningen, The Netherlands.

出版信息

Nat Nanotechnol. 2024 Jul;19(7):1022-1031. doi: 10.1038/s41565-024-01629-x. Epub 2024 Mar 19.


DOI:10.1038/s41565-024-01629-x
PMID:38504023
Abstract

Understanding how cells process nanoparticles is crucial to optimize nanomedicine efficacy. However, characterizing cellular pathways is challenging, especially if non-canonical mechanisms are involved. In this Article a genome-wide forward genetic screening based on insertional mutagenesis is applied to discover receptors and proteins involved in the intracellular accumulation (uptake and intracellular processing) of silica nanoparticles. The nanoparticles are covered by a human serum corona known to target the low-density lipoprotein receptor (LDLR). By sorting cells with reduced nanoparticle accumulation and deep sequencing after each sorting, 80 enriched genes are identified. We find that, as well as LDLR, the scavenger receptor SCARB1 also mediates nanoparticle accumulation. Additionally, heparan sulfate acts as a specific nanoparticle receptor, and its role varies depending on cell and nanoparticle type. Furthermore, some of the identified targets affect nanoparticle trafficking to the lysosomes. These results show the potential of genetic screening to characterize nanoparticle pathways. Additionally, they indicate that corona-coated nanoparticles are internalized via multiple receptors.

摘要

了解细胞如何处理纳米颗粒对于优化纳米医学的疗效至关重要。然而,表征细胞途径具有挑战性,特别是如果涉及非典型机制。在本文中,应用基于插入诱变的全基因组正向遗传筛选来发现涉及硅纳米颗粒细胞内积累(摄取和细胞内处理)的受体和蛋白质。这些纳米颗粒被一种已知靶向低密度脂蛋白受体(LDLR)的人血清冠所覆盖。通过在每次分选后对减少纳米颗粒积累的细胞进行分选和深度测序,鉴定出 80 个富集基因。我们发现,除了 LDLR 之外,清道夫受体 SCARB1 也介导纳米颗粒的积累。此外,肝素硫酸盐作为一种特异性的纳米颗粒受体,其作用因细胞和纳米颗粒类型而异。此外,一些鉴定出的靶标影响纳米颗粒向溶酶体的运输。这些结果表明遗传筛选在表征纳米颗粒途径方面具有潜力。此外,它们表明,被冠包裹的纳米颗粒通过多种受体被内吞。

相似文献

[1]
Genome-wide forward genetic screening to identify receptors and proteins mediating nanoparticle uptake and intracellular processing.

Nat Nanotechnol. 2024-7

[2]
Identifying cell receptors for the nanoparticle protein corona using genome screens.

Nat Chem Biol. 2022-9

[3]
Corona Composition Can Affect the Mechanisms Cells Use to Internalize Nanoparticles.

ACS Nano. 2019-9-23

[4]
Mechanisms of Uptake and Membrane Curvature Generation for the Internalization of Silica Nanoparticles by Cells.

Nano Lett. 2022-4-13

[5]
A nano-bio interfacial protein corona on silica nanoparticle.

Colloids Surf B Biointerfaces. 2018-4-8

[6]
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Biomaterials. 2016-9-13

[7]
The "sweet" side of the protein corona: effects of glycosylation on nanoparticle-cell interactions.

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[8]
Formation of a protein corona on silver nanoparticles mediates cellular toxicity via scavenger receptors.

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[9]
Differential Recognition of Nanoparticle Protein Corona and Modified Low-Density Lipoprotein by Macrophage Receptor with Collagenous Structure.

ACS Nano. 2018-4-26

[10]
Correlating Corona Composition and Cell Uptake to Identify Proteins Affecting Nanoparticle Entry into Endothelial Cells.

ACS Biomater Sci Eng. 2021-12-13

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[4]
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[5]
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[6]
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[7]
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本文引用的文献

[1]
Multiomics analysis of naturally efficacious lipid nanoparticle coronas reveals high-density lipoprotein is necessary for their function.

Nat Commun. 2023-7-6

[2]
Identifying cell receptors for the nanoparticle protein corona using genome screens.

Nat Chem Biol. 2022-9

[3]
Cell-surface glycosaminoglycans regulate the cellular uptake of charged polystyrene nanoparticles.

Nanoscale. 2022-5-19

[4]
On the mechanism of tissue-specific mRNA delivery by selective organ targeting nanoparticles.

Proc Natl Acad Sci U S A. 2021-12-28

[5]
Sources of variability in nanoparticle uptake by cells.

Nanoscale. 2021-10-28

[6]
Key principles and methods for studying the endocytosis of biological and nanoparticle therapeutics.

Nat Nanotechnol. 2021-3

[7]
Heparan sulfate assists SARS-CoV-2 in cell entry and can be targeted by approved drugs in vitro.

Cell Discov. 2020-11-4

[8]
Heparan sulfate proteoglycan-mediated dynamin-dependent transport of neural stem cell exosomes in an in vitro blood-brain barrier model.

Eur J Neurosci. 2021-2

[9]
Selective organ targeting (SORT) nanoparticles for tissue-specific mRNA delivery and CRISPR-Cas gene editing.

Nat Nanotechnol. 2020-4-6

[10]
Tuning liposome composition to modulate corona formation in human serum and cellular uptake.

Acta Biomater. 2020-4-1

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