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核苷脱氨酶:碱基编辑工具包中的关键角色。

Nucleoside deaminases: the key players in base editing toolkit.

作者信息

Xiang Jiangchao, Xu Wenchao, Wu Jing, Luo Yaxin, Yang Bei, Chen Jia

机构信息

Gene Editing Center, School of Life Science and Technology, ShanghaiTech University, Shanghai 201210, China.

Shanghai Institute for Advanced Immunochemical Studies, ShanghaiTech University, Shanghai 201210, China.

出版信息

Biophys Rep. 2023 Dec 31;9(6):325-337. doi: 10.52601/bpr.2023.230029.

Abstract

The development of nucleoside deaminase-containing base editors realized targeted single base change with high efficiency and precision. Such nucleoside deaminases include adenosine and cytidine deaminases, which can catalyze adenosine-to-inosine (A-to-I) and cytidine-to-uridine (C-to-U) conversion respectively. These nucleoside deaminases are under the spotlight because of their vast application potential in gene editing. Recent advances in the engineering of current nucleoside deaminases and the discovery of new nucleoside deaminases greatly broaden the application scope and improve the editing specificity of base editors. In this review, we cover current knowledge about the deaminases used in base editors, including their key structural features, working mechanisms, optimization, and evolution.

摘要

含核苷脱氨酶的碱基编辑器的发展实现了高效且精确的靶向单碱基改变。此类核苷脱氨酶包括腺苷脱氨酶和胞苷脱氨酶,它们可分别催化腺苷向肌苷(A-to-I)以及胞苷向尿苷(C-to-U)的转化。这些核苷脱氨酶因其在基因编辑中巨大的应用潜力而备受关注。当前核苷脱氨酶工程的最新进展以及新核苷脱氨酶的发现极大地拓宽了碱基编辑器的应用范围并提高了编辑特异性。在本综述中,我们涵盖了关于碱基编辑器中使用的脱氨酶的现有知识,包括它们的关键结构特征、作用机制、优化及进化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8efe/10960570/f5b1f66be89d/br-9-6-325-1.jpg

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