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准确的结构和旋转常数的甾体激素在 DFT 成本:androsterone、睾酮、雌酮、β-雌二醇和雌三醇。

Accurate Structures and Rotational Constants of Steroid Hormones at DFT Cost: Androsterone, Testosterone, Estrone, β-Estradiol, and Estriol.

机构信息

Scuola Normale Superiore di Pisa, Piazza dei Cavalieri 7, 56126 Pisa, Italy.

Scuola Superiore Meridionale, Largo San Marcellino 10, 80138 Napoli, Italy.

出版信息

J Phys Chem A. 2024 Apr 4;128(13):2629-2642. doi: 10.1021/acs.jpca.4c00573. Epub 2024 Mar 26.

DOI:10.1021/acs.jpca.4c00573
PMID:38530336
Abstract

A comprehensive analysis of the structural, conformational, and spectroscopic properties in the gas phase has been performed for five prototypical steroid hormones, namely, androsterone, testosterone, estrone, β-estradiol, and estriol. The revDSD-PBEP86 double-hybrid functional in conjunction with the D3BJ empirical dispersion and a suitable triple-ζ basis set provides accurate conformational energies and equilibrium molecular structures, with the latter being further improved by proper account of core-valence correlation. Average deviations within 0.1% between computed and experimental ground state rotational constants are reached when adding to those equilibrium values vibrational corrections obtained at the cost of standard harmonic frequencies thanks to the use of a new computational tool. Together with the intrinsic interest of the studied hormones, the accuracy of the results obtained at DFT cost for molecules containing about 50 atoms paves the way toward the accurate investigations of other flexible bricks of life.

摘要

对五种典型的甾体激素,即雄酮、睾酮、雌酮、β-雌二醇和雌三醇,在气相中的结构、构象和光谱性质进行了全面分析。采用 revDSD-PBEP86 双杂化泛函结合 D3BJ 经验色散和合适的三重ζ基组,提供了准确的构象能和平衡分子结构,通过适当考虑核价相关,进一步改善了后者。当将平衡值与由于使用新的计算工具,通过标准谐频获得的振动校正相结合时,计算得到的与实验得到的基态转动常数之间的平均偏差可达到 0.1%以内。对于包含约 50 个原子的分子,使用 DFT 方法可以获得高精度的结果,这为研究其他生命的柔性构建块铺平了道路,这些结果除了甾体激素本身的研究意义之外,还具有重要意义。

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