Department of Neurosurgery, The First Affiliated Hospital of Soochow University, Suzhou, China.
Suzhou Medical College, Soochow University, Suzhou, China.
PLoS One. 2024 Mar 26;19(3):e0298055. doi: 10.1371/journal.pone.0298055. eCollection 2024.
LINC00324 is a long-stranded non-coding RNA, which is aberrantly expressed in various cancers and is associated with poor prognosis and clinical features. It involves multiple oncogenic molecular pathways affecting cell proliferation, migration, invasion, and apoptosis. However, the expression, function, and mechanism of LINC00324 in glioma have not been reported.
We assessed the expression of LINC00324 of LINC00324 in glioma patients based on data from The Cancer Genome Atlas (TCGA) and Genotype-Tissue Expression (GTEx) to identify pathways involved in LINC00324-related glioma pathogenesis.
Based on our findings, we observed differential expression of LINC00324 between tumor and normal tissues in glioma patients. Our analysis of overall survival (OS) and disease-specific survival (DSS) indicated that glioma patients with high LINC00324 expression had a poorer prognosis compared to those with low LINC00324 expression. By integrating clinical data and genetic signatures from TCGA patients, we developed a nomogram to predict OS and DSS in glioma patients. Gene set enrichment analysis (GSEA) revealed that several pathways, including JAK/STAT3 signaling, epithelial-mesenchymal transition, STAT5 signaling, NF-κB activation, and apoptosis, were differentially enriched in glioma samples with high LINC00324 expression. Furthermore, we observed significant correlations between LINC00324 expression, immune infiltration levels, and expression of immune checkpoint-related genes (HAVCR2: r = 0.627, P = 1.54e-77; CD40: r = 0.604, P = 1.36e-70; ITGB2: r = 0.612, P = 6.33e-7; CX3CL1: r = -0.307, P = 9.24e-17). These findings highlight the potential significance of LINC00324 in glioma progression and suggest avenues for further research and potential therapeutic targets.
Indeed, our results confirm that the LINC00324 signature holds promise as a prognostic predictor in glioma patients. This finding opens up new possibilities for understanding the disease and may offer valuable insights for the development of targeted therapies.
LINC00324 是一条长链非编码 RNA,在各种癌症中异常表达,与不良预后和临床特征相关。它涉及多个致癌分子途径,影响细胞增殖、迁移、侵袭和凋亡。然而,LINC00324 在神经胶质瘤中的表达、功能和机制尚未报道。
我们根据癌症基因组图谱(TCGA)和基因型组织表达(GTEx)的数据评估了神经胶质瘤患者中 LINC00324 的表达,以确定与 LINC00324 相关的神经胶质瘤发病机制相关的途径。
根据我们的发现,我们观察到神经胶质瘤患者肿瘤组织和正常组织之间 LINC00324 的差异表达。我们对总生存期(OS)和疾病特异性生存期(DSS)的分析表明,LINC00324 高表达的神经胶质瘤患者预后较差。通过整合 TCGA 患者的临床数据和遗传特征,我们开发了一个预测神经胶质瘤患者 OS 和 DSS 的列线图。基因集富集分析(GSEA)显示,在 LINC00324 高表达的神经胶质瘤样本中,包括 JAK/STAT3 信号通路、上皮-间充质转化、STAT5 信号通路、NF-κB 激活和细胞凋亡在内的几个通路存在差异富集。此外,我们观察到 LINC00324 表达与免疫浸润水平和免疫检查点相关基因表达之间存在显著相关性(HAVCR2:r = 0.627,P = 1.54e-77;CD40:r = 0.604,P = 1.36e-70;ITGB2:r = 0.612,P = 6.33e-7;CX3CL1:r = -0.307,P = 9.24e-17)。这些发现强调了 LINC00324 在神经胶质瘤进展中的潜在意义,并为进一步研究和潜在的治疗靶点提供了思路。
事实上,我们的结果证实,LINC00324 特征可以作为神经胶质瘤患者的预后预测指标。这一发现为理解该疾病开辟了新的可能性,并可能为靶向治疗的发展提供有价值的见解。