• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

物种特异性转录因子与内源性逆转录病毒的长末端重复启动子相关:全面综述。

Species-Specific Transcription Factors Associated with Long Terminal Repeat Promoters of Endogenous Retroviruses: A Comprehensive Review.

机构信息

Department of Microbiology, Faculty of Life Sciences, Kumamoto University, Kumamoto 860-8556, Japan.

出版信息

Biomolecules. 2024 Feb 26;14(3):280. doi: 10.3390/biom14030280.

DOI:10.3390/biom14030280
PMID:38540701
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10968565/
Abstract

Endogenous retroviruses (ERVs) became a part of the eukaryotic genome through endogenization millions of years ago. Moreover, they have lost their innate capability of virulence or replication. Nevertheless, in eukaryotic cells, they actively engage in various activities that may be advantageous or disadvantageous to the cells. The mechanisms by which transcription is triggered and implicated in cellular processes are complex. Owing to the diversity in the expression of transcription factors (TFs) in cells and the TF-binding motifs of viruses, the comprehensibility of ERV initiation and its impact on cellular functions are unclear. Currently, several factors are known to be related to their initiation. TFs that bind to the viral long-terminal repeat (LTR) are critical initiators. This review discusses the TFs shown to actively associate with ERV stimulation across species such as humans, mice, pigs, monkeys, zebrafish, Drosophila, and yeast. A comprehensive summary of the expression of previously reported TFs may aid in identifying similarities between animal species and endogenous viruses. Moreover, an in-depth understanding of ERV expression will assist in elucidating their physiological roles in eukaryotic cell development and in clarifying their relationship with endogenous retrovirus-associated diseases.

摘要

内源性逆转录病毒(ERVs)在数百万年前通过内源性化成为真核生物基因组的一部分。此外,它们已经失去了固有毒性或复制能力。然而,在真核细胞中,它们积极参与各种可能对细胞有利或不利的活动。转录被触发并参与细胞过程的机制很复杂。由于细胞中转录因子(TFs)的表达多样性和病毒的 TF 结合基序,ERV 起始的可理解性及其对细胞功能的影响尚不清楚。目前,已知有几个因素与它们的起始有关。与病毒长末端重复序列(LTR)结合的 TF 是关键的启动子。这篇综述讨论了在人类、小鼠、猪、猴子、斑马鱼、果蝇和酵母等物种中被证明与 ERV 刺激积极相关的 TF。对先前报道的 TF 表达的全面总结可以帮助识别动物物种和内源性病毒之间的相似性。此外,深入了解 ERV 的表达将有助于阐明它们在真核细胞发育中的生理作用,并澄清它们与内源性逆转录病毒相关疾病的关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca24/10968565/48d3584863cc/biomolecules-14-00280-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca24/10968565/baca5e8eb1b7/biomolecules-14-00280-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca24/10968565/48d3584863cc/biomolecules-14-00280-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca24/10968565/baca5e8eb1b7/biomolecules-14-00280-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ca24/10968565/48d3584863cc/biomolecules-14-00280-g002.jpg

相似文献

1
Species-Specific Transcription Factors Associated with Long Terminal Repeat Promoters of Endogenous Retroviruses: A Comprehensive Review.物种特异性转录因子与内源性逆转录病毒的长末端重复启动子相关:全面综述。
Biomolecules. 2024 Feb 26;14(3):280. doi: 10.3390/biom14030280.
2
Endogenous retrovirus long terminal repeats as ready-to-use mobile promoters: the case of primate beta3GAL-T5.内源性逆转录病毒长末端重复序列作为现成的移动启动子:以灵长类β3GAL-T5为例
Gene. 2005 Dec 30;364:2-12. doi: 10.1016/j.gene.2005.05.045. Epub 2005 Aug 22.
3
Genome-Wide Characterization of Zebrafish Endogenous Retroviruses Reveals Unexpected Diversity in Genetic Organizations and Functional Potentials.鱼类内源性逆转录病毒的全基因组特征分析揭示了其在遗传组织和功能潜力方面的出人意料的多样性。
Microbiol Spectr. 2021 Dec 22;9(3):e0225421. doi: 10.1128/spectrum.02254-21. Epub 2021 Dec 15.
4
Detection of long terminal repeat loci derived from endogenous retrovirus in junglefowl using whole-genome sequencing.利用全基因组测序检测丛林鸡中内源性逆转录病毒的长末端重复序列。
Sci Rep. 2023 May 6;13(1):7380. doi: 10.1038/s41598-023-34520-1.
5
Tracking the Fate of Endogenous Retrovirus Segregation in Wild and Domestic Cats.追踪内源性逆转录病毒在野生和家猫中的分离命运。
J Virol. 2019 Nov 26;93(24). doi: 10.1128/JVI.01324-19. Print 2019 Dec 15.
6
Origins and evolutionary consequences of ancient endogenous retroviruses.远古内源性逆转录病毒的起源和进化后果。
Nat Rev Microbiol. 2019 Jun;17(6):355-370. doi: 10.1038/s41579-019-0189-2.
7
Existence of Two Distinct Infectious Endogenous Retroviruses in Domestic Cats and Their Different Strategies for Adaptation to Transcriptional Regulation.家猫体内两种不同的传染性内源性逆转录病毒的存在及其适应转录调控的不同策略。
J Virol. 2016 Sep 29;90(20):9029-45. doi: 10.1128/JVI.00716-16. Print 2016 Oct 15.
8
A novel class III endogenous retrovirus with a class I envelope gene in African frogs with an intact genome and developmentally regulated transcripts in Xenopus tropicalis.在具有完整基因组和发育调控转录本的非洲青蛙中发现了一种新型 III 类内源性逆转录病毒,其包膜基因属于 I 类。
Retrovirology. 2021 Jul 14;18(1):20. doi: 10.1186/s12977-021-00564-2.
9
The long terminal repeat (LTR) of ERV-9 human endogenous retrovirus binds to NF-Y in the assembly of an active LTR enhancer complex NF-Y/MZF1/GATA-2.ERV-9人类内源性逆转录病毒的长末端重复序列(LTR)在活性LTR增强子复合物NF-Y/MZF1/GATA-2的组装过程中与NF-Y结合。
J Biol Chem. 2005 Oct 21;280(42):35184-94. doi: 10.1074/jbc.M508138200. Epub 2005 Aug 16.
10
Utility of next-generation RNA-sequencing in identifying chimeric transcription involving human endogenous retroviruses.新一代RNA测序在鉴定涉及人类内源性逆转录病毒的嵌合转录本中的应用。
APMIS. 2016 Jan-Feb;124(1-2):127-39. doi: 10.1111/apm.12477.

引用本文的文献

1
Investigation of Polymorphisms Induced by the Solo Long Terminal Repeats (Solo-LTRs) in Porcine Endogenous Retroviruses (ERVs).猪内源性逆转录病毒(ERVs)中单独长末端重复序列(Solo-LTRs)诱导的多态性研究。
Viruses. 2024 Nov 20;16(11):1801. doi: 10.3390/v16111801.
2
Transcription of Endogenous Retroviruses: Broad and Precise Mechanisms of Control.内源性逆转录病毒的转录:广泛而精确的控制机制。
Viruses. 2024 Aug 17;16(8):1312. doi: 10.3390/v16081312.
3
RNaseH-based ribodepletion of total planarian RNA improves detection of longer and non-polyadenylated transcripts.

本文引用的文献

1
Epstein-Barr Virus and Human Endogenous Retrovirus in Japanese Patients with Autoimmune Demyelinating Disorders.日本自身免疫性脱髓鞘疾病患者中的 Epstein-Barr 病毒和人类内源性逆转录病毒。
Int J Mol Sci. 2023 Dec 5;24(24):17151. doi: 10.3390/ijms242417151.
2
Human Endogenous Retrovirus-K (HML-2)-Related Genetic Variation: Human Genome Diversity and Disease.人类内源性逆转录病毒-K(HML-2)相关遗传变异:人类基因组多样性与疾病。
Genes (Basel). 2023 Nov 28;14(12):2150. doi: 10.3390/genes14122150.
3
Reactivated endogenous retroviruses promote protein aggregate spreading.
基于核糖核酸酶H的涡虫总RNA去核糖体处理可改善对较长和非多聚腺苷酸化转录本的检测。
bioRxiv. 2024 Jul 21:2024.07.20.604429. doi: 10.1101/2024.07.20.604429.
内源性逆转录病毒的激活促进了蛋白质聚集体的扩散。
Nat Commun. 2023 Aug 18;14(1):5034. doi: 10.1038/s41467-023-40632-z.
4
Antibodies against endogenous retroviruses promote lung cancer immunotherapy.针对内源性逆转录病毒的抗体可促进肺癌免疫治疗。
Nature. 2023 Apr;616(7957):563-573. doi: 10.1038/s41586-023-05771-9. Epub 2023 Apr 12.
5
Transcription of MERVL retrotransposons is required for preimplantation embryo development.MERVL 逆转录转座子的转录对于胚胎植入前的发育是必需的。
Nat Genet. 2023 Mar;55(3):484-495. doi: 10.1038/s41588-023-01324-y. Epub 2023 Mar 2.
6
Expression of Human Endogenous Retrovirus Group K (HERV-K) HML-2 Correlates with Immune Activation of Macrophages and Type I Interferon Response.人类内源性逆转录病毒K组(HERV-K)HML-2的表达与巨噬细胞的免疫激活及I型干扰素反应相关。
Microbiol Spectr. 2023 Mar 2;11(2):e0443822. doi: 10.1128/spectrum.04438-22.
7
Resurrection of endogenous retroviruses during aging reinforces senescence.衰老过程中内源性逆转录病毒的复活增强了衰老。
Cell. 2023 Jan 19;186(2):287-304.e26. doi: 10.1016/j.cell.2022.12.017. Epub 2023 Jan 6.
8
Detection and genetic characterization of feline retroviruses in domestic cats with different clinical signs and hematological alterations.检测并分析具有不同临床症状和血液学改变的家猫体内的逆转录病毒,并对其遗传特征进行分析。
Arch Virol. 2022 Dec 19;168(1):2. doi: 10.1007/s00705-022-05627-z.
9
Species-specific rewiring of definitive endoderm developmental gene activation via endogenous retroviruses through TET1-mediated demethylation.通过 TET1 介导的去甲基化作用,内源性逆转录病毒特异性重排确定内胚层发育基因的激活。
Cell Rep. 2022 Dec 13;41(11):111791. doi: 10.1016/j.celrep.2022.111791.
10
Human endogenous retroviruses in cancer: Oncogenesis mechanisms and clinical implications.人类内源性逆转录病毒与癌症:致癌机制与临床意义。
J Med Virol. 2023 Jan;95(1):e28350. doi: 10.1002/jmv.28350.