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全蛋白质组孟德尔随机化和共定位分析鉴定膝关节和髋关节骨关节炎的治疗靶点。

Proteome-Wide Mendelian Randomization and Colocalization Analysis Identify Therapeutic Targets for Knee and Hip Osteoarthritis.

机构信息

Department of Sports Medicine, Peking University Third Hospital, Institute of Sports Medicine of Peking University, Beijing 100191, China.

Beijing Key Laboratory of Sports Injuries, Engineering Research Center of Sports Trauma Treatment Technology and Devices, Ministry of Education, Beijing 100191, China.

出版信息

Biomolecules. 2024 Mar 15;14(3):355. doi: 10.3390/biom14030355.

Abstract

Osteoarthritis (OA) is a common degenerative disease. Although some biomarkers and drug targets of OA have been discovered and employed, limitations and challenges still exist in the targeted therapy of OA. Mendelian randomization (MR) analysis has been regarded as a reliable analytic method to identify effective therapeutic targets. Thus, we aimed to identify novel therapeutic targets for OA and investigate their potential side effects based on MR analysis. In this study, two-sample MR, colocalization analysis, summary-data-based Mendelian randomization (SMR) and Mendelian randomization phenome-wide association study (MR-PheWAS) were conducted. We firstly analyzed data from 4907 plasma proteins to identify potential therapeutic targets associated with OA. In addition, blood expression quantitative trait loci (eQTLs) data sources were used to perform additional validation. A protein-protein interaction (PPI) network was also constructed to delve into the interactions among identified proteins. Then, MR-PheWASs were utilized to assess the potential side effects of core therapeutic targets. After MR analysis and FDR correction, we identified twelve proteins as potential therapeutic targets for knee OA or hip OA. Colocalization analysis and additional validation supported our findings, and PPI networks revealed the interactions among identified proteins. Finally, we identified MAPK3 (OR = 0.855, 95% CI: 0.791-0.923, = 6.88 × 10) and GZMK (OR = 1.278, 95% CI: 1.131-1.444, = 8.58 × 10) as the core therapeutic targets for knee OA, and ITIH1 (OR = 0.847, 95% CI: 0.784-0.915, = 2.44 × 10) for hip OA. A further MR phenome-wide association study revealed the potential side effects of treatments targeting MAPK3, GZMK, and ITIH1. This comprehensive study indicates twelve plasma proteins with potential roles in knee and hip OA as therapeutic targets. This advancement holds promise for the progression of OA drug development, and paves the way for more efficacious treatments of OA.

摘要

骨关节炎(OA)是一种常见的退行性疾病。虽然已经发现并应用了一些 OA 的生物标志物和药物靶点,但 OA 的靶向治疗仍然存在局限性和挑战。孟德尔随机分析(MR)已被认为是识别有效治疗靶点的可靠分析方法。因此,我们旨在基于 MR 分析鉴定 OA 的新治疗靶点,并研究其潜在的副作用。在这项研究中,我们进行了两样本 MR、共定位分析、基于汇总数据的孟德尔随机分析(SMR)和孟德尔随机表型全关联研究(MR-PheWAS)。我们首先分析了 4907 种血浆蛋白的数据,以鉴定与 OA 相关的潜在治疗靶点。此外,还使用血液表达数量性状基因座(eQTL)数据来源进行了额外的验证。还构建了蛋白质-蛋白质相互作用(PPI)网络,以深入研究鉴定出的蛋白质之间的相互作用。然后,利用 MR-PheWAS 评估核心治疗靶点的潜在副作用。经过 MR 分析和 FDR 校正,我们确定了 12 种蛋白质作为膝骨关节炎或髋骨关节炎的潜在治疗靶点。共定位分析和额外的验证支持了我们的发现,PPI 网络揭示了鉴定出的蛋白质之间的相互作用。最后,我们确定了 MAPK3(OR=0.855,95%CI:0.791-0.923, = 6.88×10)和 GZMK(OR=1.278,95%CI:1.131-1.444, = 8.58×10)为膝骨关节炎的核心治疗靶点,ITIH1(OR=0.847,95%CI:0.784-0.915, = 2.44×10)为髋骨关节炎的核心治疗靶点。进一步的 MR 表型全关联研究揭示了针对 MAPK3、GZMK 和 ITIH1 的治疗的潜在副作用。这项综合研究表明,12 种血浆蛋白可能在膝骨关节炎和髋骨关节炎中发挥作用,可作为治疗靶点。这一进展有望推动 OA 药物开发的进展,为 OA 的更有效治疗铺平道路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a7a/10967895/657f0b290c10/biomolecules-14-00355-g001.jpg

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