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拟南芥基因家族及其在非生物胁迫响应中的潜在作用。

The Gene Family and Their Potential Roles in Responses to Abiotic Stress in .

机构信息

College of Horticulture Science and Engineering, Shandong Agricultural University, Tai'an 271018, China.

出版信息

Int J Mol Sci. 2024 Mar 21;25(6):3541. doi: 10.3390/ijms25063541.

Abstract

() genes play key roles in plant root and pollen tube growth, phytohormone responses, and abiotic stress responses. genes in have not yet been explored. Here, genes were found to be distributed across eight chromosomes in and were classified into three subfamilies. Promoter sequence analysis of revealed the presence of -elements characteristic of promoters, and these -elements play a role in regulating abiotic stress tolerance and stress-related hormone responses. Organ-specific expression profiling demonstrated that were ubiquitously expressed in all organs, especially the roots, suggesting that they play a role in diverse biological processes. Gene expression analysis revealed that the expression of was significantly up-regulated under osmotic stress and salt stress. RT-qPCR analysis revealed that the expression of was significantly down-regulated under various types of abiotic stress. Protein-protein interaction (PPI) network analysis revealed interactions between RopGEF11, the homolog of , and the VPS34 protein in , as well as interactions between , the homolog of in Arabidopsis, and the ABI1, HAB1, PP2CA, and CPK4 proteins. VPS34, ABI1, HAB1, PP2CA, and CPK4 have previously been shown to confer resistance to unfavorable environments. Overall, our findings suggest that and play significant roles in regulating abiotic stress tolerance. These findings will aid future studies aimed at clarifying the functional characteristics of .

摘要

()基因在植物根和花粉管生长、植物激素响应和非生物胁迫响应中发挥关键作用。在 中, 基因尚未被探索。在这里,发现 基因分布在 中的八个染色体上,并被分为三个亚家族。对 启动子序列的分析表明,存在与 启动子特征一致的 - 元件,这些 - 元件在调节非生物胁迫耐受性和与胁迫相关的激素响应中发挥作用。组织特异性表达谱分析表明, 在所有器官中广泛表达,特别是在根部,表明它们在多种生物学过程中发挥作用。基因表达分析表明,在渗透胁迫和盐胁迫下, 的表达显著上调。RT-qPCR 分析表明,在各种类型的非生物胁迫下, 的表达显著下调。蛋白质-蛋白质相互作用 (PPI) 网络分析表明,在 中,RopGEF11 与 的同源物之间存在相互作用,以及与拟南芥中的 同源物之间存在相互作用,以及与 ABI1、HAB1、PP2CA 和 CPK4 蛋白之间存在相互作用。先前已经表明,VPS34、ABI1、HAB1、PP2CA 和 CPK4 赋予了对不利环境的抗性。总体而言,我们的研究结果表明 和 在调节非生物胁迫耐受性方面发挥着重要作用。这些发现将有助于未来阐明 功能特征的研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56f4/10971340/577bc2498fd1/ijms-25-03541-g001.jpg

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