Yeung Pak-Hei, Hesse Linde S, Aliasi Moska, Haak Monique C, Xie Weidi, Namburete Ana I L
Department of Engineering Science, Institute of Biomedical Engineering, University of Oxford, Oxford, United Kingdom; Oxford Machine Learning in NeuroImaging Lab, Department of Computer Science, University of Oxford, OX1 3QD, United Kingdom.
Department of Engineering Science, Institute of Biomedical Engineering, University of Oxford, Oxford, United Kingdom; Oxford Machine Learning in NeuroImaging Lab, Department of Computer Science, University of Oxford, OX1 3QD, United Kingdom.
Med Image Anal. 2024 May;94:103147. doi: 10.1016/j.media.2024.103147. Epub 2024 Mar 26.
Three-dimensional (3D) ultrasound imaging has contributed to our understanding of fetal developmental processes by providing rich contextual information of the inherently 3D anatomies. However, its use is limited in clinical settings, due to the high purchasing costs and limited diagnostic practicality. Freehand 2D ultrasound imaging, in contrast, is routinely used in standard obstetric exams, but inherently lacks a 3D representation of the anatomies, which limits its potential for more advanced assessment. Such full representations are challenging to recover even with external tracking devices due to internal fetal movement which is independent from the operator-led trajectory of the probe. Capitalizing on the flexibility offered by freehand 2D ultrasound acquisition, we propose ImplicitVol to reconstruct 3D volumes from non-sensor-tracked 2D ultrasound sweeps. Conventionally, reconstructions are performed on a discrete voxel grid. We, however, employ a deep neural network to represent, for the first time, the reconstructed volume as an implicit function. Specifically, ImplicitVol takes a set of 2D images as input, predicts their locations in 3D space, jointly refines the inferred locations, and learns a full volumetric reconstruction. When testing natively-acquired and volume-sampled 2D ultrasound video sequences collected from different manufacturers, the 3D volumes reconstructed by ImplicitVol show significantly better visual and semantic quality than the existing interpolation-based reconstruction approaches. The inherent continuity of implicit representation also enables ImplicitVol to reconstruct the volume to arbitrarily high resolutions. As formulated, ImplicitVol has the potential to integrate seamlessly into the clinical workflow, while providing richer information for diagnosis and evaluation of the developing brain.
三维(3D)超声成像通过提供固有三维解剖结构的丰富背景信息,有助于我们理解胎儿发育过程。然而,由于高昂的购置成本和有限的诊断实用性,其在临床环境中的应用受到限制。相比之下,徒手二维超声成像在标准产科检查中经常使用,但本质上缺乏解剖结构的三维表示,这限制了其进行更高级评估的潜力。由于胎儿内部运动独立于操作员引导的探头轨迹,即使使用外部跟踪设备,也很难恢复这种完整表示。利用徒手二维超声采集提供的灵活性,我们提出了ImplicitVol,用于从非传感器跟踪的二维超声扫描中重建三维体积。传统上,重建是在离散的体素网格上进行的。然而,我们首次使用深度神经网络将重建的体积表示为隐函数。具体来说,ImplicitVol将一组二维图像作为输入,预测它们在三维空间中的位置,联合优化推断的位置,并学习完整的体积重建。在测试从不同制造商收集的原生获取和体积采样的二维超声视频序列时,ImplicitVol重建的三维体积在视觉和语义质量上明显优于现有的基于插值的重建方法。隐式表示的固有连续性还使ImplicitVol能够将体积重建到任意高分辨率。按照公式化,ImplicitVol有潜力无缝集成到临床工作流程中,同时为发育中的大脑的诊断和评估提供更丰富的信息。