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蛇毒肽组学分析。

Analysis of the Snake Venom Peptidome.

机构信息

Laboratório de Toxinologia Aplicada, Center of Toxins, Immune-Response and Cell Signaling (CeTICS), Instituto Butantan, São Paulo, SP, Brazil.

Instituto de Ciência e Tecnologia, Universidade Federal de São Paulo, São José dos Campos, SP, Brazil.

出版信息

Methods Mol Biol. 2024;2758:319-329. doi: 10.1007/978-1-0716-3646-6_17.

DOI:10.1007/978-1-0716-3646-6_17
PMID:38549022
Abstract

Snake venom peptidomes are known to be a large source of molecules with different pharmacological properties. The complexity and variability of snake venoms, the presence of proteinases, and the lack of complete species-specific genome sequences make snake venom peptidome profiling a challenging task that requires especial technical strategies for sample processing and mass spectrometric analysis. Here, we describe a method for assessing the content of snake venom peptides and highlight the importance of sampling procedures, as they substantially influence the peptidomic complexity of snake venoms.

摘要

蛇毒肽组被认为是具有不同药理特性的分子的重要来源。蛇毒的复杂性和变异性、蛋白酶的存在以及缺乏完整的特定物种基因组序列,使得蛇毒肽组谱分析成为一项具有挑战性的任务,需要特别的技术策略来进行样品处理和质谱分析。在这里,我们描述了一种评估蛇毒肽含量的方法,并强调了采样程序的重要性,因为它们会极大地影响蛇毒的肽组复杂性。

相似文献

1
Analysis of the Snake Venom Peptidome.蛇毒肽组学分析。
Methods Mol Biol. 2024;2758:319-329. doi: 10.1007/978-1-0716-3646-6_17.
2
Analysis of the Snake Venom Peptidome.蛇毒肽组分析
Methods Mol Biol. 2018;1719:349-358. doi: 10.1007/978-1-4939-7537-2_23.
3
Peptidomics of three Bothrops snake venoms: insights into the molecular diversification of proteomes and peptidomes.三种矛头蝮蛇蛇毒的肽组学研究:对蛋白质组和肽组分子多样性的深入了解。
Mol Cell Proteomics. 2012 Nov;11(11):1245-62. doi: 10.1074/mcp.M112.019331. Epub 2012 Aug 6.
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A first step towards building spectral libraries as complementary tools for snake venom proteome/peptidome studies.建立光谱库作为蛇毒蛋白质组/肽组研究的补充工具的第一步。
Comp Biochem Physiol Part D Genomics Proteomics. 2019 Sep;31:100599. doi: 10.1016/j.cbd.2019.100599. Epub 2019 May 31.
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Unveiling the peptidome diversity of Lachesismuta snake venom: Discovery of novel fragments of metalloproteinase, l-amino acid oxidase, and bradykinin potentiating peptides.揭示 Lachesismuta 蛇毒的肽组多样性:发现新型金属蛋白酶、L-氨基酸氧化酶和缓激肽增效肽片段。
Biochem Biophys Res Commun. 2023 Nov 26;683:149090. doi: 10.1016/j.bbrc.2023.10.022. Epub 2023 Oct 6.
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Venom peptide analysis of Vipera ammodytes meridionalis (Viperinae) and Bothrops jararacussu (Crotalinae) demonstrates subfamily-specificity of the peptidome in the family Viperidae.南欧蝰(蝰亚科)和巴西矛头蝮(蝮亚科)的毒液肽分析表明蝰蛇科肽组具有亚科特异性。
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本文引用的文献

1
Comparative gender peptidomics of venoms: are there differences between them?毒液的性别肽组学比较:它们之间存在差异吗?
J Venom Anim Toxins Incl Trop Dis. 2020 Oct 7;26:e20200055. doi: 10.1590/1678-9199-JVATITD-2020-0055.
2
A first step towards building spectral libraries as complementary tools for snake venom proteome/peptidome studies.建立光谱库作为蛇毒蛋白质组/肽组研究的补充工具的第一步。
Comp Biochem Physiol Part D Genomics Proteomics. 2019 Sep;31:100599. doi: 10.1016/j.cbd.2019.100599. Epub 2019 May 31.
3
An in-depth snake venom proteopeptidome characterization: Benchmarking Bothrops jararaca.
深入剖析蛇毒蛋白质组学特征:以巴西矛头蝮蛇为研究对象
J Proteomics. 2017 Jan 16;151:214-231. doi: 10.1016/j.jprot.2016.06.029. Epub 2016 Jun 30.
4
Proteomic identification of gender molecular markers in Bothrops jararaca venom.矛头蝮蛇毒中性别分子标记的蛋白质组学鉴定
J Proteomics. 2016 Apr 29;139:26-37. doi: 10.1016/j.jprot.2016.02.030. Epub 2016 Mar 2.
5
Combined venomics, venom gland transcriptomics, bioactivities, and antivenomics of two Bothrops jararaca populations from geographic isolated regions within the Brazilian Atlantic rainforest.巴西大西洋雨林中地理隔离区域的两个巴西矛头蝮种群的联合毒液组学、毒腺转录组学、生物活性及抗蛇毒血清组学研究
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Unraveling snake venom complexity with 'omics' approaches: challenges and perspectives.运用“组学”方法解析蛇毒的复杂性:挑战与展望
Toxicon. 2014 Sep;87:131-4. doi: 10.1016/j.toxicon.2014.05.011. Epub 2014 May 27.
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A transcriptomic view of the proteome variability of newborn and adult Bothrops jararaca snake venoms.新生和成年巴西矛头蝮蛇毒液蛋白质组变异性的转录组学观察
PLoS Negl Trop Dis. 2012;6(3):e1554. doi: 10.1371/journal.pntd.0001554. Epub 2012 Mar 13.
8
Venom peptide analysis of Vipera ammodytes meridionalis (Viperinae) and Bothrops jararacussu (Crotalinae) demonstrates subfamily-specificity of the peptidome in the family Viperidae.南欧蝰(蝰亚科)和巴西矛头蝮(蝮亚科)的毒液肽分析表明蝰蛇科肽组具有亚科特异性。
Mol Biosyst. 2011 Dec;7(12):3298-307. doi: 10.1039/c1mb05309d. Epub 2011 Sep 29.
9
Bradykinin-potentiating peptides: beyond captopril.缓激肽增强肽:超越卡托普利。
Toxicon. 2012 Mar 15;59(4):516-23. doi: 10.1016/j.toxicon.2011.07.013. Epub 2011 Aug 2.
10
Analysis of the ontogenetic variation in the venom proteome/peptidome of Bothrops jararaca reveals different strategies to deal with prey.分析矛头蝮属(Bothrops jararaca)毒液蛋白质组/多肽组的个体发生变化揭示了应对猎物的不同策略。
J Proteome Res. 2010 May 7;9(5):2278-91. doi: 10.1021/pr901027r.