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通过整合网络药理学、分子对接和模拟方法探索来自[具体来源未给出]的潜在植物化合物在治疗糖尿病中的作用机制。

Exploring the therapeutic mechanism of potential phytocompounds from in the treatment of diabetes mellitus by integrating network pharmacology, molecular docking and simulation approach.

作者信息

Halayal Rekha Y, Bagewadi Zabin K, Aldabaan Nayef Abdulaziz, Shaikh Ibrahim Ahmed, Khan Aejaz Abdullatif

机构信息

Department of Biotechnology, KLE Technological University, Hubballi, Karnataka 580031, India.

Department of Pharmacology, College of Pharmacy, Najran University, Najran 66462, Saudi Arabia.

出版信息

Saudi Pharm J. 2024 May;32(5):102026. doi: 10.1016/j.jsps.2024.102026. Epub 2024 Mar 13.

Abstract

Since ancient times, bioactive phytocompounds from different parts of medicinal plants have been used to heal various disease ailments and they are now regarded as a valuable source of disease prevention globally.  is a member of the Crassulaceae family; it has a long history of usage in traditional ayurvedic treatment. Analysis of bioactive compounds for their potential anti-type-2 diabetes mellitus (T2DM) mechanism along with  and  approaches was studied in the present research. The alpha-amylase and alpha-glucosidase inhibitory activity of methanolic extract of (α-amylase: IC 29.50 ± 0.04 μg/ml; α-glucosidase IC 32.04 ± 0.35 μg/ml) exhibit a high degree of similarity to the standard drug acarbose (IC 35.82 ± 0.14 μg/ml). Different biological databases were used to list phytocompounds from the plant, and ADME analysis using swissADME was carried out to screen compounds that obeyed the Lipinski rule of 5 and were employed further. STRING and KEGG pathway analysis was performed for gene enrichment analysis followed by network pharmacology to identify key target proteins involved in DM. AMY2A, NOX4, RPS6KA3, ADRA2A, CHRM5, and IL2 were identified as core targets for luteolin, kaempferol, alpha amyrin, stigmasterol compounds by modulating neuroactive ligand interaction, P13-AKT, MAPK, and PPAR signaling pathways. Molecular docking was performed to study the binding affinity among bioactive compounds of against aldose reductase, alpha-amylase, alpha-glucosidase, and dipeptidyl peptidase IV. Alpha-amylase-friedelin [FRI] and alpha-amylase-acarbose [STD] complexes were subjected to molecular simulation for a 200 ns duration that depicted the stability of the compounds and proteins. In the current study, employing dual approach and  enzyme assays has yielded a comprehensive and strong understanding of its potential therapeutic properties, making a significant step towards the development of novel anti-diabetic treatment.

摘要

自古以来,药用植物不同部位的生物活性植物化合物就被用于治疗各种疾病,如今它们被视为全球疾病预防的宝贵资源。[植物名称]是景天科的一员;它在传统阿育吠陀疗法中有悠久的使用历史。本研究对生物活性化合物的潜在抗2型糖尿病(T2DM)机制以及[相关技术名称1]和[相关技术名称2]方法进行了分析。[植物名称]甲醇提取物的α-淀粉酶和α-葡萄糖苷酶抑制活性(α-淀粉酶:IC50为29.50±0.04μg/ml;α-葡萄糖苷酶IC50为32.04±0.35μg/ml)与标准药物阿卡波糖(IC50为35.82±0.14μg/ml)具有高度相似性。使用不同的生物数据库列出该植物的植物化合物,并使用swissADME进行ADME分析,以筛选符合Lipinski五规则的化合物并进一步应用。进行STRING和KEGG通路分析以进行基因富集分析,随后通过网络药理学确定参与糖尿病的关键靶蛋白。通过调节神经活性配体相互作用、P13 - AKT、MAPK和PPAR信号通路,确定AMY2A、NOX4、RPS6KA3、ADRA2A CHRM5和IL2为木犀草素、山奈酚、α-香树脂醇、豆甾醇化合物的核心靶点。进行分子对接以研究[植物名称]生物活性化合物与醛糖还原酶、α-淀粉酶、α-葡萄糖苷酶和二肽基肽酶IV之间的结合亲和力。对α-淀粉酶-蛇麻脂醇[FRI]和α-淀粉酶-阿卡波糖[STD]复合物进行了持续200 ns的分子模拟,描绘了化合物和蛋白质的稳定性。在当前研究中,采用[相关技术名称1]和[相关技术名称2]双酶法对其潜在治疗特性有了全面而深入的了解,朝着开发新型抗糖尿病治疗迈出了重要一步。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1744/10973190/240e6a854053/ga1.jpg

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