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循环 miRNA 特征可预测林奇综合征中的癌症发病风险:一项初步研究

Circulating miRNA Signature Predicts Cancer Incidence in Lynch Syndrome-A Pilot Study.

机构信息

Gerontology Research Center and Faculty of Sport and Health Sciences, University of Jyväskylä, Jyväskylä, Finland.

The wellbeing services county of Central Finland, Jyväskylä, Finland.

出版信息

Cancer Prev Res (Phila). 2024 Jun 4;17(6):243-254. doi: 10.1158/1940-6207.CAPR-23-0368.

Abstract

UNLABELLED

Lynch syndrome (LS) is the most common autosomal dominant cancer syndrome and is characterized by high genetic cancer risk modified by lifestyle factors. This study explored whether a circulating miRNA (c-miR) signature predicts LS cancer incidence within a 4-year prospective surveillance period. To gain insight how lifestyle behavior could affect LS cancer risk, we investigated whether the cancer-predicting c-miR signature correlates with known risk-reducing factors such as physical activity, body mass index (BMI), dietary fiber, or NSAID usage. The study included 110 c-miR samples from LS carriers, 18 of whom were diagnosed with cancer during a 4-year prospective surveillance period. Lasso regression was utilized to find c-miRs associated with cancer risk. Individual risk sum derived from the chosen c-miRs was used to develop a model to predict LS cancer incidence. This model was validated using 5-fold cross-validation. Correlation and pathway analyses were applied to inspect biological functions of c-miRs. Pearson correlation was used to examine the associations of c-miR risk sum and lifestyle factors. hsa-miR-10b-5p, hsa-miR-125b-5p, hsa-miR-200a-3p, hsa-miR-3613-5p, and hsa-miR-3615 were identified as cancer predictors by Lasso, and their risk sum score associated with higher likelihood of cancer incidence (HR 2.72, 95% confidence interval: 1.64-4.52, C-index = 0.72). In cross-validation, the model indicated good concordance with the average C-index of 0.75 (0.6-1.0). Coregulated hsa-miR-10b-5p, hsa-miR-125b-5p, and hsa-miR-200a-3p targeted genes involved in cancer-associated biological pathways. The c-miR risk sum score correlated with BMI (r = 0.23, P < 0.01). In summary, BMI-associated c-miRs predict LS cancer incidence within 4 years, although further validation is required.

PREVENTION RELEVANCE

The development of cancer risk prediction models is key to improving the survival of patients with LS. This pilot study describes a serum miRNA signature-based risk prediction model that predicts LS cancer incidence within 4 years, although further validation is required.

摘要

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林奇综合征(LS)是最常见的常染色体显性遗传癌症综合征,其特征是遗传癌症风险高,受生活方式因素影响。本研究旨在探讨循环 miRNA(c-miR)特征是否可预测 LS 癌症的 4 年前瞻性监测期内的发病情况。为了深入了解生活方式行为如何影响 LS 癌症风险,我们研究了癌症预测性 c-miR 特征是否与已知的风险降低因素相关,如身体活动、体重指数(BMI)、膳食纤维或 NSAID 使用情况。该研究纳入了 110 名 LS 携带者的 110 个 c-miR 样本,其中 18 名在 4 年的前瞻性监测期内被诊断为癌症。采用套索回归法寻找与癌症风险相关的 c-miRs。从选定的 c-miRs 中得出的个体风险总和用于开发预测 LS 癌症发病的模型。该模型采用 5 倍交叉验证进行验证。应用相关性和通路分析来检测 c-miRs 的生物学功能。采用 Pearson 相关性分析检验 c-miR 风险总和与生活方式因素的相关性。hsa-miR-10b-5p、hsa-miR-125b-5p、hsa-miR-200a-3p、hsa-miR-3613-5p 和 hsa-miR-3615 通过 Lasso 被鉴定为癌症预测因子,其风险总和与更高的癌症发病可能性相关(HR 2.72,95%置信区间:1.64-4.52,C 指数=0.72)。在交叉验证中,模型的平均 C 指数为 0.75(0.6-1.0),表明一致性较好。核心调控的 hsa-miR-10b-5p、hsa-miR-125b-5p 和 hsa-miR-200a-3p 的靶向基因参与癌症相关的生物学通路。c-miR 风险总和与 BMI 相关(r=0.23,P<0.01)。总之,4 年内 BMI 相关的 c-miRs 可预测 LS 癌症的发病情况,但需要进一步验证。

预防相关性

癌症风险预测模型的开发是提高 LS 患者生存率的关键。本初步研究描述了一种基于血清 miRNA 特征的风险预测模型,可预测 LS 癌症在 4 年内的发病情况,但需要进一步验证。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e828/11148538/cf8afc089df8/243fig1.jpg

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