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多聚磷酸盐影响氮饥饿条件下细胞质和染色体的动态变化。

Polyphosphate affects cytoplasmic and chromosomal dynamics in nitrogen-starved .

机构信息

Laboratory of Experimental Biophysics, Institute of Physics, École Polytechnique Fédérale de Lausanne, Lausanne CH-1015, Switzerland.

Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125.

出版信息

Proc Natl Acad Sci U S A. 2024 Apr 9;121(15):e2313004121. doi: 10.1073/pnas.2313004121. Epub 2024 Apr 2.

Abstract

Polyphosphate (polyP) synthesis is a ubiquitous stress and starvation response in bacteria. In diverse species, mutants unable to make polyP have a wide variety of physiological defects, but the mechanisms by which this simple polyanion exerts its effects remain unclear. One possibility is that polyP's many functions stem from global effects on the biophysical properties of the cell. We characterize the effect of polyphosphate on cytoplasmic mobility under nitrogen-starvation conditions in the opportunistic pathogen . Using fluorescence microscopy and particle tracking, we quantify the motion of chromosomal loci and cytoplasmic tracer particles. In the absence of polyP and upon starvation, we observe a 2- to 10-fold increase in mean cytoplasmic diffusivity. Tracer particles reveal that polyP also modulates the partitioning between a "more mobile" and a "less mobile" population: Small particles in cells unable to make polyP are more likely to be "mobile" and explore more of the cytoplasm, particularly during starvation. Concomitant with this larger freedom of motion in polyP-deficient cells, we observe decompaction of the nucleoid and an increase in the steady-state concentration of ATP. The dramatic polyP-dependent effects we observe on cytoplasmic transport properties occur under nitrogen starvation, but not carbon starvation, suggesting that polyP may have distinct functions under different types of starvation.

摘要

多聚磷酸盐(polyP)的合成为细菌普遍存在的应激和饥饿反应。在不同的物种中,不能合成多聚磷酸盐的突变体有各种各样的生理缺陷,但这种简单的多阴离子发挥作用的机制尚不清楚。一种可能性是多聚磷酸盐的许多功能源于对细胞生物物理特性的全局影响。我们在机会致病菌中描述了在氮饥饿条件下多聚磷酸盐对细胞质流动性的影响。我们使用荧光显微镜和颗粒跟踪技术,定量测量染色体位点和细胞质示踪粒子的运动。在没有多聚磷酸盐和饥饿的情况下,我们观察到细胞质扩散率平均增加了 2 到 10 倍。示踪粒子揭示了多聚磷酸盐还调节了“更易动”和“更不易动”群体之间的分配:无法合成多聚磷酸盐的细胞中的小颗粒更有可能是“易动”的,并探索更多的细胞质,特别是在饥饿期间。伴随着多聚磷酸盐缺陷细胞中更大的运动自由度,我们观察到核体解压缩和 ATP 稳态浓度增加。我们在氮饥饿条件下观察到的对细胞质转运特性的显著多聚磷酸盐依赖性影响,但在碳饥饿条件下没有观察到,这表明多聚磷酸盐在不同类型的饥饿下可能具有不同的功能。

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