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Seizing the moment: now is the time for integrated global surveillance of antimicrobial resistance in wastewater environments.把握时机:现在是对废水环境中的抗微生物药物耐药性进行综合全球监测的时候了。
Curr Opin Microbiol. 2021 Dec;64:91-99. doi: 10.1016/j.mib.2021.09.013. Epub 2021 Oct 13.
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The Contribution of Wastewater to the Transmission of Antimicrobial Resistance in the Environment: Implications of Mass Gathering Settings.废水对环境中抗菌药物耐药性传播的影响:大型集会场所的启示
Trop Med Infect Dis. 2020 Feb 25;5(1):33. doi: 10.3390/tropicalmed5010033.
3
Assembly of long, error-prone reads using repeat graphs.使用重复图组装长的、易错的读取。
Nat Biotechnol. 2019 May;37(5):540-546. doi: 10.1038/s41587-019-0072-8. Epub 2019 Apr 1.
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Minimap2: pairwise alignment for nucleotide sequences.Minimap2:核苷酸序列的两两比对。
Bioinformatics. 2018 Sep 15;34(18):3094-3100. doi: 10.1093/bioinformatics/bty191.
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Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.单轮循环器:从短读长和长读长测序数据中解析细菌基因组组装结果
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6
In silico detection and typing of plasmids using PlasmidFinder and plasmid multilocus sequence typing.使用质粒查找工具(PlasmidFinder)和质粒多位点序列分型进行质粒的电子检测和分型
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QUAST: quality assessment tool for genome assemblies.QUAST:基因组组装质量评估工具。
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来自新西兰奥特亚罗瓦的产超广谱β-内酰胺酶、AmpC酶和碳青霉烯酶的革兰氏阴性废水分离株。

Extended-spectrum beta-lactamase, AmpC, and carbapenemase-producing Gram-negative wastewater isolates from Aotearoa New Zealand.

作者信息

Straub Christina, Weaver Louise, Cornelius Angela J, McGill Erin, Dyet Kristin, Pattis Isabelle

机构信息

Institute of Environmental Science and Research Ltd., Health & Environment, Auckland, New Zealand.

University of Vienna, Centre for Microbiology and Environmental Systems Science, Vienna, Austria.

出版信息

Microbiol Resour Announc. 2024 May 9;13(5):e0013124. doi: 10.1128/mra.00131-24. Epub 2024 Apr 2.

DOI:10.1128/mra.00131-24
PMID:38564672
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11080521/
Abstract

Extended-spectrum beta-lactamase, AmpC, and carbapenemase-producing bacteria were isolated from raw sewage, effluent, oxidation pond water, and sediment from a wastewater treatment plant in Aotearoa New Zealand. Here, we report the assemblies of 17 isolates belonging to the species , , , , , , , , , and .

摘要

从新西兰奥特亚罗瓦一个污水处理厂的原污水、废水、氧化塘水和沉积物中分离出了产超广谱β-内酰胺酶、AmpC酶和碳青霉烯酶的细菌。在此,我们报告了属于 、 、 、 、 、 、 、 、 和 物种的17株分离株的基因组组装情况。