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基于PC-SAFT状态方程,利用经典密度泛函理论从明尼苏达溶剂化数据库预测溶剂化自由能。

Predicting Solvation Free Energies from the Minnesota Solvation Database Using Classical Density Functional Theory Based on the PC-SAFT Equation of State.

作者信息

Bursik Benjamin, Eller Johannes, Gross Joachim

机构信息

Institute of Thermodynamics and Thermal Process Engineering, University of Stuttgart, Stuttgart 70569, Germany.

出版信息

J Phys Chem B. 2024 Apr 18;128(15):3677-3688. doi: 10.1021/acs.jpcb.3c07447. Epub 2024 Apr 5.

Abstract

We critically assess the capabilities of classical density functional theory (DFT) based on the perturbed-chain statistical associating fluid theory (PC-SAFT) equation of state to predict the solvation free energies of small molecules in various hydrocarbon solvents. We compare DFT results with experimental data from the Minnesota solvation database and utilize statistical methods to analyze the accuracy of our approach, as well as its weaknesses. The mean absolute error of the solvation free energies is 3.7 kJ mol for -alkane solvents, ranging from pentane to hexadecane, with 473 solute-solvent systems. For solvents consisting of cyclic hydrocarbons (cyclohexane, benzene, toluene, and ethylbenzene) with 245 solute-solvent systems, we report a slightly larger mean absolute error of 4.2 kJ mol. We identify three possible sources of errors: (i) the neglect of solute-solvent and solvent-solvent Coulomb interactions, which limits the applicability of PC-SAFT DFT to nonpolar and weakly polar molecules; (ii) the solute's Lennard-Jones parameters supplied by the general AMBER force field, which are not parametrized toward solvation free energies; and (iii) the application of the Lorentz-Berthelot combining rules to the dispersive interactions between a segment of the PC-SAFT solvent and a Lennard-Jones interaction site of the solute. The approach is more accurate than standard implementations of phenomenological models in common chemistry software packages, which exhibit mean absolute errors larger than 9.12 kJ mol, even though newer phenomenological models achieve a mean absolute error of about 2 kJ mol. PC-SAFT DFT is more computationally efficient than state of the art explicit molecular simulations in combination with free energy perturbation methods. It is predictive with respect to solvation free energies, i.e., the input for the model is the (element-specific) molecular force field, the solute configuration from molecular dynamics simulations, and the (substance-specific) PC-SAFT parameters. The PC-SAFT parametrization uses pure-component data and does not require experimental solvation free energies. The PC-SAFT equation of state, without applying a DFT formalism, can also be used to calculate solvation free energies, provided that the PC-SAFT parameters for the solute are available. A large number of substances was recently parametrized by members of our group (Esper, T.; Bauer, G.; Rehner, P.; Gross, J. , ), which enables a comparison to the DFT approach for 103 substances. Accurate results are obtained from the PC-SAFT equation of state with an MAE below 2.51 kJ mol. The DFT approach does not require PC-SAFT parameters for the solute and can be applied to all solutes that can be represented by the molecular force field.

摘要

我们基于扰动链统计缔合流体理论(PC - SAFT)状态方程,对经典密度泛函理论(DFT)预测小分子在各种烃类溶剂中的溶剂化自由能的能力进行了严格评估。我们将DFT结果与明尼苏达溶剂化数据库的实验数据进行比较,并使用统计方法分析我们方法的准确性及其弱点。对于从戊烷到十六烷的直链烷烃溶剂,473个溶质 - 溶剂体系的溶剂化自由能平均绝对误差为3.7 kJ/mol。对于由环烃(环己烷、苯、甲苯和乙苯)组成的溶剂,245个溶质 - 溶剂体系的平均绝对误差略大,为4.2 kJ/mol。我们确定了三个可能的误差来源:(i)忽略溶质 - 溶剂和溶剂 - 溶剂库仑相互作用,这限制了PC - SAFT DFT对非极性和弱极性分子的适用性;(ii)由通用AMBER力场提供的溶质的 Lennard - Jones参数,其未针对溶剂化自由能进行参数化;(iii)将洛伦兹 - 贝托洛混合规则应用于PC - SAFT溶剂的一个链段与溶质的Lennard - Jones相互作用位点之间的色散相互作用。该方法比普通化学软件包中现象学模型的标准实现更准确,后者的平均绝对误差大于9.12 kJ/mol,尽管更新的现象学模型平均绝对误差约为2 kJ/mol。PC - SAFT DFT在计算上比结合自由能微扰方法的现有显式分子模拟更高效。它对于溶剂化自由能具有预测性,即模型的输入是(特定元素的)分子力场、分子动力学模拟得到的溶质构型以及(特定物质的)PC - SAFT参数。PC - SAFT参数化使用纯组分数据,不需要实验溶剂化自由能。如果有溶质的PC - SAFT参数,PC - SAFT状态方程在不应用DFT形式主义的情况下也可用于计算溶剂化自由能。最近我们小组的成员(埃斯珀,T.;鲍尔,G.;雷纳,P.;格罗斯,J. )对大量物质进行了参数化,这使得能够对103种物质与DFT方法进行比较。从PC - SAFT状态方程获得的准确结果的平均绝对误差低于2.51 kJ/mol。DFT方法不需要溶质的PC - SAFT参数,并且可以应用于所有能用分子力场表示的溶质。

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