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细胞周期蛋白 B1:一种泛癌中的潜在预后和免疫生物标志物。

Cyclin B1: A potential prognostic and immunological biomarker in pan-cancer.

机构信息

Department of Pathology, Hubei Provincial Hospital of Traditional Chinese Medicine, Wuhan, China; Hospital Department, Hubei University of Chinese Medicine, Wuhan, China.

出版信息

Biomol Biomed. 2024 Sep 6;24(5):1150-1169. doi: 10.17305/bb.2024.10253.

Abstract

Cyclin B1 (CCNB1) encodes a regulatory protein essential for the regulation of cell mitosis, particularly in controlling the G2/M transition phase of the cell cycle. Current research has implicated CCNB1 in the progression of various types of cancer, including gastric cancer, breast cancer, and non-small cell lung cancer. In this study, we conducted a pan-cancer analysis of CCNB1 to investigate its prognostic significance and immunological aspects. Our comprehensive investigation covered a wide range of analyses, including gene expression, promoter methylation, genetic alterations, immune infiltration, immune regulators, and enrichment studies. We utilized multiple databases and tools for this purpose, such as The Cancer Genome Atlas (TCGA), the Genotype-Tissue Expression (GTEx) project, the Human Protein Atlas (HPA), the University of Alabama at Birmingham CANcer data analysis Portal (UALCAN), the Gene Expression Profiling Interactive Analysis (GEPIA), the DNA Methylation Interactive Visualization Database (DNMIVD), the Search Tool for the Retrieval of Interacting Genes/Proteins (STRING), Sangerbox, and cBioPortal. Data analyses were executed using GraphPad Prism software, R software, and various online tools. Our findings demonstrated a significant increase in CCNB1 expression across 28 cancer types. Elevated CCNB1 expression correlated with decreased overall survival (OS) in 11 cancer types and disease-free survival (DFS) in 12 cancer types. Additionally, DNA promoter methylation levels were significantly decreased in 14 cancer types. Furthermore, the study verified a significant association between CCNB1 expression and immune infiltration, immune modulators, microsatellite instability (MSI), and tumor mutational burden (TMB). Enrichment analysis indicated that CCNB1 is involved in multiple cellular pathways. Collectively, our results suggested that CCNB1 has the potential to serve as a valuable prognostic biomarker and may be a promising target for immunotherapy in various cancer types.

摘要

细胞周期蛋白 B1(CCNB1)编码一种调节蛋白,对细胞有丝分裂的调节至关重要,特别是在控制细胞周期的 G2/M 转换阶段。目前的研究表明 CCNB1 参与了多种类型的癌症的进展,包括胃癌、乳腺癌和非小细胞肺癌。在这项研究中,我们对 CCNB1 进行了泛癌分析,以研究其预后意义和免疫学方面。我们的综合研究包括基因表达、启动子甲基化、遗传改变、免疫浸润、免疫调节剂和富集研究。为此,我们使用了多个数据库和工具,如癌症基因组图谱(TCGA)、组织表达(GTEx)项目、人类蛋白质图谱(HPA)、阿拉巴马大学伯明翰癌症数据分析门户(UALCAN)、基因表达谱交互分析(GEPIA)、DNA 甲基化交互可视化数据库(DNMIVD)、搜索工具检索相互作用基因/蛋白质(STRING)、Sangerbox 和 cBioPortal。数据分析使用 GraphPad Prism 软件、R 软件和各种在线工具执行。我们的研究结果表明,在 28 种癌症类型中 CCNB1 的表达显著增加。11 种癌症中 CCNB1 表达升高与总生存期(OS)降低相关,12 种癌症中与无病生存期(DFS)降低相关。此外,14 种癌症中 DNA 启动子甲基化水平显著降低。此外,研究还验证了 CCNB1 表达与免疫浸润、免疫调节剂、微卫星不稳定性(MSI)和肿瘤突变负荷(TMB)之间存在显著关联。富集分析表明 CCNB1 参与了多个细胞途径。总之,我们的研究结果表明,CCNB1 有可能成为一种有价值的预后生物标志物,并且可能是各种癌症类型免疫治疗的有前途的靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6933/11378994/eac7cadcb9fd/bb-2024-10253f1.jpg

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