Guerra Jessica, Belleri Mirella, Paiardi Giulia, Tobia Chiara, Capoferri Davide, Corli Marzia, Scalvini Elisa, Ghirimoldi Marco, Manfredi Marcello, Wade Rebecca C, Presta Marco, Mignani Luca
Department of Molecular and Translational Medicine, University of Brescia, Brescia, Italy.
Molecular and Cellular Modeling Group, Heidelberg Institute for Theoretical Studies, Germany.
Comput Struct Biotechnol J. 2024 Mar 30;23:1397-1407. doi: 10.1016/j.csbj.2024.03.023. eCollection 2024 Dec.
Krabbe disease is a sphingolipidosis characterized by the genetic deficiency of the acid hydrolase β-galactosylceramidase (GALC). Most of the studies concerning the biological role of GALC performed on Krabbe patients and -deficient mice (an authentic animal model of the disease) indicate that the pathogenesis of this disorder is the consequence of the accumulation of the neurotoxic GALC substrate β-galactosylsphingosine (psychosine), ignoring the possibility that this enzyme may exert a wider biological impact. Indeed, limited information is available about the effect of GALC downregulation on the cell lipidome in adult and developing organisms. The teleost zebrafish () has emerged as a useful platform to model human genetic diseases, including sphingolipidoses, and two co-orthologs have been identified in zebrafish ( and ). Here, we investigated the effect of the competitive and irreversible GALC inhibitor β-galactose-cyclophellitol (GCP) on the lipid profile of zebrafish embryos. Molecular modelling indicates that GCP can be sequestered in the catalytic site of the enzyme and covalently binds human GALC, and the zebrafish Galca and Galcb proteins in a similar manner. Accordingly, GCP inhibits the β-galactosylceramide hydrolase activity of zebrafish and , leading to significant alterations of the lipidome of zebrafish embryos. These results indicate that the lack of GALC activity deeply affects the lipidome during the early stages of embryonic development, and thereby provide insights into the pathogenesis of Krabbe disease.
克拉伯病是一种鞘脂贮积病,其特征是酸性水解酶β-半乳糖基神经酰胺酶(GALC)存在基因缺陷。大多数针对克拉伯病患者和基因缺陷小鼠(该疾病的真实动物模型)进行的关于GALC生物学作用的研究表明,这种疾病的发病机制是神经毒性GALC底物β-半乳糖基鞘氨醇(精神鞘氨醇)积累的结果,而忽略了这种酶可能产生更广泛生物学影响的可能性。事实上,关于GALC下调对成年和发育中生物体细胞脂质组的影响,目前可用信息有限。硬骨鱼斑马鱼已成为模拟人类遗传疾病(包括鞘脂贮积病)的有用平台,并且在斑马鱼中已鉴定出两个共同直系同源基因(Galca和Galcb)。在此,我们研究了竞争性和不可逆的GALC抑制剂β-半乳糖-环戊烯醇(GCP)对斑马鱼胚胎脂质谱的影响。分子建模表明,GCP可以被隔离在该酶的催化位点,并以类似方式与人类GALC以及斑马鱼Galca和Galcb蛋白共价结合。相应地,GCP抑制斑马鱼Galca和Galcb的β-半乳糖基神经酰胺水解酶活性,并导致斑马鱼胚胎脂质组发生显著改变。这些结果表明,GALC活性的缺乏在胚胎发育早期对脂质组有深刻影响,从而为克拉伯病的发病机制提供了见解。