Demian Miracle Destiny, Amasiorah Victor Ikechukwu, Johnson Titilayo Omolara, Ebenyi Lilian N
Department of Biotechnology, Ebonyi State University, Abakaliki, Ebonyi State Nigeria.
National Biotechnology Development Agency, Abuja, Nigeria.
In Silico Pharmacol. 2024 Apr 7;12(1):27. doi: 10.1007/s40203-024-00193-5. eCollection 2024.
Androgen receptor (AR) is known to play a crucial role in the development and progression of prostate cancer, and compounds that inhibit its activity are regarded as promising for the development of drugs to treat the disease. This study aimed to investigate the AR-inhibiting potential of fruit compounds for prostate cancer drug development. Following HPLC identification, the binding energies, molecular interactions, and pharmacological potentials of the compounds against AR were elucidated using in silico techniques such as, molecular docking, induced-fit docking, molecular dynamics simulation, and ADMET prediction. Some of the compounds found to be present in fruit included flavonoids such as proanthocyanin, naringin, flavan 3 ol, flavonones, naringenin, epicatechin, citrulline, and catechin. Naringenin exhibited the highest docking score in the molecular docking analysis, followed by resveratrol, ribalinidine, and epicatechin. These compounds share a common AR binding site with the standard ligand, dihydrotestosterone (DHT). Some of the compounds showed favorable ADMET profiles, while others showed at least one toxicity potential. The induced-fit docking of naringenin with AR yielded a higher docking score than the initial score obtained from standard docking while preserving stable molecular contacts with the interacting amino acids. Consistent hydrogen bond interactions of naringenin with PHE 764, ASN 705, and THR 877 of AR, including a persistent pi-pi stacking contact with PHE 764, were observed from the molecular dynamic simulation. The compounds, particularly naringenin, may therefore be considered for further research towards the development of drugs for prostate cancer therapy.
雄激素受体(AR)在前列腺癌的发生和发展中起着关键作用,抑制其活性的化合物被认为有望用于开发治疗该疾病的药物。本研究旨在探讨水果化合物对前列腺癌药物开发的AR抑制潜力。通过高效液相色谱法(HPLC)鉴定后,利用分子对接、诱导契合对接、分子动力学模拟和ADMET预测等计算机技术阐明了这些化合物与AR的结合能、分子相互作用和药理潜力。发现水果中存在的一些化合物包括原花青素、柚皮苷、黄烷-3-醇、黄酮酮、柚皮素、表儿茶素、瓜氨酸和儿茶素等黄酮类化合物。在分子对接分析中,柚皮素表现出最高的对接分数,其次是白藜芦醇、ribalinidine和表儿茶素。这些化合物与标准配体二氢睾酮(DHT)共享一个共同的AR结合位点。一些化合物显示出良好的ADMET特性,而另一些则显示出至少一种潜在毒性。柚皮素与AR的诱导契合对接产生的对接分数高于标准对接获得的初始分数,同时与相互作用的氨基酸保持稳定的分子接触。从分子动力学模拟中观察到柚皮素与AR的PHE 764、ASN 705和THR 877之间持续的氢键相互作用,包括与PHE 764持续的π-π堆积接触。因此,这些化合物,特别是柚皮素,可考虑进一步研究用于开发前列腺癌治疗药物。