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ULTRA-SR 挑战赛:超分辨率成像中超声定位和跟踪算法的评估。

ULTRA-SR Challenge: Assessment of Ultrasound Localization and TRacking Algorithms for Super-Resolution Imaging.

出版信息

IEEE Trans Med Imaging. 2024 Aug;43(8):2970-2987. doi: 10.1109/TMI.2024.3388048. Epub 2024 Aug 1.

DOI:10.1109/TMI.2024.3388048
PMID:38607705
Abstract

With the widespread interest and uptake of super-resolution ultrasound (SRUS) through localization and tracking of microbubbles, also known as ultrasound localization microscopy (ULM), many localization and tracking algorithms have been developed. ULM can image many centimeters into tissue in-vivo and track microvascular flow non-invasively with sub-diffraction resolution. In a significant community effort, we organized a challenge, Ultrasound Localization and TRacking Algorithms for Super-Resolution (ULTRA-SR). The aims of this paper are threefold: to describe the challenge organization, data generation, and winning algorithms; to present the metrics and methods for evaluating challenge entrants; and to report results and findings of the evaluation. Realistic ultrasound datasets containing microvascular flow for different clinical ultrasound frequencies were simulated, using vascular flow physics, acoustic field simulation and nonlinear bubble dynamics simulation. Based on these datasets, 38 submissions from 24 research groups were evaluated against ground truth using an evaluation framework with six metrics, three for localization and three for tracking. In-vivo mouse brain and human lymph node data were also provided, and performance assessed by an expert panel. Winning algorithms are described and discussed. The publicly available data with ground truth and the defined metrics for both localization and tracking present a valuable resource for researchers to benchmark algorithms and software, identify optimized methods/software for their data, and provide insight into the current limits of the field. In conclusion, Ultra-SR challenge has provided benchmarking data and tools as well as direct comparison and insights for a number of the state-of-the art localization and tracking algorithms.

摘要

随着超分辨率超声(SRUS)通过微泡的定位和跟踪技术(也称为超声定位显微镜(ULM))的广泛关注和应用,许多定位和跟踪算法已经被开发出来。ULM 可以在体内对几厘米深的组织进行成像,并以亚衍射分辨率非侵入性地跟踪微血管的流动。在一次重要的社区努力中,我们组织了一次挑战,即超分辨率超声定位和跟踪算法挑战赛(ULTRA-SR)。本文的目的有三个:描述挑战赛的组织、数据生成和获胜算法;介绍评估挑战赛参与者的指标和方法;并报告评估的结果和发现。使用血管流物理、声场模拟和非线性气泡动力学模拟,模拟了针对不同临床超声频率的微血管流动的真实超声数据集。基于这些数据集,24 个研究小组中的 38 个提交作品使用具有六个指标的评估框架,其中三个用于定位,三个用于跟踪,与真实值进行了评估。还提供了体内老鼠大脑和人类淋巴结的数据,并由专家组进行了性能评估。描述并讨论了获胜算法。具有真实值和用于定位和跟踪的定义指标的公开数据集为研究人员提供了一个宝贵的资源,可以对算法和软件进行基准测试,为他们的数据确定优化的方法/软件,并深入了解该领域的当前限制。总之,Ultra-SR 挑战赛提供了基准数据和工具,以及一些最先进的定位和跟踪算法的直接比较和见解。

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