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基因组和表观基因组对跨尺度韧性的影响:鱼类应对环境胁迫反应的启示。

Genomic and Epigenomic Influences on Resilience across Scales: Lessons from the Responses of Fish to Environmental Stressors.

机构信息

Department of Zoology, University of British Columbia, Vancouver, BC, V6T 1Z4, Canada.

出版信息

Integr Comp Biol. 2024 Sep 27;64(3):853-866. doi: 10.1093/icb/icae019.

Abstract

Understanding the factors that influence the resilience of biological systems to environmental change is a pressing concern in the face of increasing human impacts on ecosystems and the organisms that inhabit them. However, most considerations of biological resilience have focused at the community and ecosystem levels, whereas here we discuss how including consideration of processes occurring at lower levels of biological organization may provide insights into factors that influence resilience at higher levels. Specifically, we explore how processes at the genomic and epigenomic levels may cascade up to influence resilience at higher levels. We ask how the concepts of "resistance," or the capacity of a system to minimize change in response to a disturbance, and "recovery," or the ability of a system to return to its original state following a disturbance and avoid tipping points and resulting regime shifts, map to these lower levels of biological organization. Overall, we suggest that substantial changes at these lower levels may be required to support resilience at higher levels, using selected examples of genomic and epigenomic responses of fish to climate-change-related stressors such as high temperature and hypoxia at the levels of the genome, epigenome, and organism.

摘要

了解影响生物系统对环境变化的恢复力的因素是当前面临的一个紧迫问题,因为人类对生态系统和其中的生物的影响越来越大。然而,大多数对生物恢复力的考虑都集中在群落和生态系统层面,而在这里,我们讨论了在较低的生物组织层次上考虑发生的过程如何为影响较高层次恢复力的因素提供新的认识。具体来说,我们探讨了基因组和表观基因组层面的过程如何级联到影响较高层次的恢复力。我们问,“抵抗”或系统在受到干扰时最小化变化的能力,以及“恢复”或系统在受到干扰后恢复到原来状态并避免临界点和由此产生的状态转变的能力,如何映射到这些较低的生物组织层次。总的来说,我们认为,为了在较高层次上支持恢复力,可能需要在这些较低层次上进行重大改变,我们使用鱼类对与气候变化相关的胁迫(如高温和缺氧)的基因组、表观基因组和生物体层面的反应的一些基因组和表观基因组的例子来说明。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e490/11445785/50e2418f1a86/icae019fig1.jpg

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