Laboratory of RNA Function, Institute for Quantitative Biosciences, The University of Tokyo, Bunkyo-ku, Tokyo, 113-0032, Japan.
Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, Bunkyo-ku, Tokyo, 113-0032, Japan.
EMBO Rep. 2024 May;25(5):2239-2257. doi: 10.1038/s44319-024-00137-2. Epub 2024 Apr 17.
The PIWI-interacting RNA (piRNA) pathway plays a crucial role in silencing transposons in the germline. piRNA-guided target cleavage by PIWI proteins triggers the biogenesis of new piRNAs from the cleaved RNA fragments. This process, known as the ping-pong cycle, is mediated by the two PIWI proteins, Siwi and BmAgo3, in silkworms. However, the detailed molecular mechanism of the ping-pong cycle remains largely unclear. Here, we show that Spindle-E (Spn-E), a putative ATP-dependent RNA helicase, is essential for BmAgo3-dependent production of Siwi-bound piRNAs in the ping-pong cycle and that this function of Spn-E requires its ATPase activity. Moreover, Spn-E acts to suppress homotypic Siwi-Siwi ping-pong, but this function of Spn-E is independent of its ATPase activity. These results highlight the dual role of Spn-E in facilitating proper heterotypic ping-pong in silkworms.
PIWI 相互作用 RNA (piRNA) 通路在生殖细胞中转座子的沉默中起着至关重要的作用。piRNA 引导的 PIWI 蛋白对靶 RNA 的切割触发了新的 piRNA 从切割的 RNA 片段的生物发生。这个过程被称为乒乓循环,由两种 PIWI 蛋白,即家蚕中的 Siwi 和 BmAgo3 介导。然而,乒乓循环的详细分子机制在很大程度上仍不清楚。在这里,我们表明,Spindle-E(Spn-E),一种假定的 ATP 依赖性 RNA 解旋酶,对 BmAgo3 依赖性产生 Siwi 结合的 piRNA 在乒乓循环中是必不可少的,并且 Spn-E 的这一功能需要其 ATP 酶活性。此外,Spn-E 可抑制同型 Siwi-Siwi 乒乓循环,但 Spn-E 的这一功能不依赖于其 ATP 酶活性。这些结果突出了 Spn-E 在促进家蚕中适当异型乒乓循环中的双重作用。