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基于多空间表面参数和机器学习的光学相干断层扫描用于多细胞肿瘤球体分类识别及药物筛选分类

Optical coherence tomography for multicellular tumor spheroid category recognition and drug screening classification via multi-spatial-superficial-parameter and machine learning.

作者信息

Yan Feng, Mutembei Bornface, Valerio Trisha, Gunay Gokhan, Ha Ji-Hee, Zhang Qinghao, Wang Chen, Selvaraj Mercyshalinie Ebenezer Raj, Alhajeri Zaid A, Zhang Fan, Dockery Lauren E, Li Xinwei, Liu Ronghao, Dhanasekaran Danny N, Acar Handan, Chen Wei R, Tang Qinggong

机构信息

Stephenson School of Biomedical Engineering, University of Oklahoma, Norman, OK 73019, USA.

Department of Cell Biology, University of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA.

出版信息

Biomed Opt Express. 2024 Mar 4;15(4):2014-2047. doi: 10.1364/BOE.514079. eCollection 2024 Apr 1.

DOI:10.1364/BOE.514079
PMID:38633082
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11019711/
Abstract

Optical coherence tomography (OCT) is an ideal imaging technique for noninvasive and longitudinal monitoring of multicellular tumor spheroids (MCTS). However, the internal structure features within MCTS from OCT images are still not fully utilized. In this study, we developed cross-statistical, cross-screening, and composite-hyperparameter feature processing methods in conjunction with 12 machine learning models to assess changes within the MCTS internal structure. Our results indicated that the effective features combined with supervised learning models successfully classify OVCAR-8 MCTS culturing with 5,000 and 50,000 cell numbers, MCTS with pancreatic tumor cells (Panc02-H7) culturing with the ratio of 0%, 33%, 50%, and 67% of fibroblasts, and OVCAR-4 MCTS treated by 2-methoxyestradiol, AZD1208, and R-ketorolac with concentrations of 1, 10, and 25 µM. This approach holds promise for obtaining multi-dimensional physiological and functional evaluations for using OCT and MCTS in anticancer studies.

摘要

光学相干断层扫描(OCT)是用于多细胞肿瘤球体(MCTS)无创和纵向监测的理想成像技术。然而,OCT图像中MCTS的内部结构特征仍未得到充分利用。在本研究中,我们结合12种机器学习模型开发了交叉统计、交叉筛选和复合超参数特征处理方法,以评估MCTS内部结构的变化。我们的结果表明,有效特征与监督学习模型相结合,成功地对细胞数量为5000和50000的OVCAR-8 MCTS培养物、成纤维细胞比例分别为0%、33%、50%和67%的胰腺肿瘤细胞(Panc02-H7)MCTS以及用浓度为1、10和25 μM的2-甲氧基雌二醇、AZD1208和R-酮咯酸处理的OVCAR-4 MCTS进行了分类。这种方法有望在抗癌研究中利用OCT和MCTS获得多维生理和功能评估。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c59f/11019711/3c9d6a8e2b8a/boe-15-4-2014-g011.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c59f/11019711/5168537d908d/boe-15-4-2014-g006.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c59f/11019711/c4d82137d719/boe-15-4-2014-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c59f/11019711/3c9d6a8e2b8a/boe-15-4-2014-g011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c59f/11019711/df9da83718f0/boe-15-4-2014-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c59f/11019711/b7b97fe90497/boe-15-4-2014-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c59f/11019711/ae7d22af5e9b/boe-15-4-2014-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c59f/11019711/808f2fda2a11/boe-15-4-2014-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c59f/11019711/6c595d1796e1/boe-15-4-2014-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c59f/11019711/5168537d908d/boe-15-4-2014-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c59f/11019711/238bd8d648ff/boe-15-4-2014-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c59f/11019711/7ade09999a3d/boe-15-4-2014-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c59f/11019711/4f9edff9c919/boe-15-4-2014-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c59f/11019711/c4d82137d719/boe-15-4-2014-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c59f/11019711/3c9d6a8e2b8a/boe-15-4-2014-g011.jpg

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