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2017-2021 年中国 8 个省份儿童严重急性呼吸道感染相关人腺病毒的遗传特征。

Genetic characterization of pediatric SARI-associated human adenoviruses in eight Chinese provinces during 2017-2021.

机构信息

National Key Laboratory of Intelligent Tracking and Forecasting for Infectious Disease, NHC Key Laboratory of Medical Virology and Viral Diseases, National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.

Institute of Immunization Program, Henan Provincial Center for Disease Control and Prevention, Zhengzhou, China.

出版信息

J Med Virol. 2024 Apr;96(4):e29618. doi: 10.1002/jmv.29618.

DOI:10.1002/jmv.29618
PMID:38639293
Abstract

Human adenovirus (HAdV) is a significant viral pathogen causing severe acute respiratory infections (SARIs) in children. To improve the understanding of type distribution and viral genetic characterization of HAdV in severe cases, this study enrolled 3404 pediatric SARI cases from eight provinces of China spanning 2017-2021, resulting in the acquisition of 112 HAdV strains. HAdV-type identification, based on three target genes (penton base, hexon, and fiber), confirmed the diversity of HAdV types in SARI cases. Twelve types were identified, including species B (HAdV-3, 7, 55), species C (HAdV-1, 2, 6, 89, 108, P89H5F5, Px1/Ps3H1F1, Px1/Ps3H5F5), and E (HAdV-4). Among these, HAdV-3 exhibited the highest detection rate (44.6%), followed by HAdV-7 (19.6%), HAdV-1 (12.5%), and HAdV-108 (9.8%). All HAdV-3, 7, 55, 4 in this study belonged to dominant lineages circulating worldwide, and the sequences of the three genes demonstrated significant conservation and stability. Concerning HAdV-C, excluding the novel type Px1/Ps3H1F1 found in this study, the other seven types were detected both in China and abroad, with HAdV-1 and HAdV-108 considered the two main types of HAdV-C prevalent in China. Two recombinant strains, including P89H5F5 and Px1/Ps3H1F1, could cause SARI as a single pathogen, warranting close monitoring and investigation for potential public health implications. In conclusion, 5 years of SARI surveillance in China provided crucial insights into HAdV-associated respiratory infections among hospitalized pediatric patients.

摘要

人腺病毒(HAdV)是一种重要的病毒病原体,可导致儿童严重急性呼吸道感染(SARIs)。为了提高对严重病例中 HAdV 型别分布和病毒遗传特征的认识,本研究在中国 8 个省份的 3404 例儿科 SARIs 病例中进行了研究,时间跨度为 2017-2021 年,共获得了 112 株 HAdV 株。基于三个靶基因(五邻体、六邻体和纤维)的 HAdV 型别鉴定,证实了 SARIs 病例中 HAdV 型别的多样性。共鉴定出 12 种类型,包括属 B(HAdV-3、7、55)、属 C(HAdV-1、2、6、89、108、P89H5F5、Px1/Ps3H1F1、Px1/Ps3H5F5)和 E(HAdV-4)。其中,HAdV-3 的检出率最高(44.6%),其次是 HAdV-7(19.6%)、HAdV-1(12.5%)和 HAdV-108(9.8%)。本研究中所有的 HAdV-3、7、55、4 均属于全球流行的优势谱系,三个基因的序列表现出显著的保守性和稳定性。关于 HAdV-C,除了本研究发现的新型 Px1/Ps3H1F1 外,其他七种类型在中国和国外均有检出,其中 HAdV-1 和 HAdV-108 被认为是中国流行的两种主要的 HAdV-C 型。两种重组株,包括 P89H5F5 和 Px1/Ps3H1F1,可作为单一病原体引起 SARI,需要密切监测和调查,以评估其对潜在公共卫生的影响。总之,中国 5 年的 SARIs 监测为住院儿科患者的 HAdV 相关呼吸道感染提供了重要的见解。

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