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高光谱近地感知在叶片和冠层尺度估算光合能力中的应用。

Hyperspectral Proximal Sensing for Estimating Photosynthetic Capacities at Leaf and Canopy Scales.

机构信息

Center for Advanced Agriculture and Sustainability, Harrisburg University, Harrisburg, PA, USA.

Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA.

出版信息

Methods Mol Biol. 2024;2790:355-372. doi: 10.1007/978-1-0716-3790-6_18.

DOI:10.1007/978-1-0716-3790-6_18
PMID:38649580
Abstract

Agronomists, plant breeders, and plant biologists have been promoting the need to develop high-throughput methods to measure plant traits of interest for decades. Measuring these plant traits or phenotypes is often a bottleneck since skilled personnel, resources, and ample time are required. Additionally, plant phenotypic traits from only a select number of breeding lines or varieties can be quantified because the "gold standard" measurement of a desired trait cannot be completed in a timely manner. As such, numerous approaches have been developed and implemented to better understand the biology and production of crops and ecosystems. In this chapter, we explain one of the recent approaches leveraging hyperspectral measurements to estimate different aspects of photosynthesis. Notably, we outline the use of hyperspectral radiometer and imaging to rapidly estimate two of the rate-limiting steps of photosynthesis: the maximum rate of the carboxylation of Rubisco (V) and the maximum rate of electron transfer or regeneration of RuBP (J).

摘要

几十年来,农学家、植物育种家和植物生物学家一直在提倡开发高通量方法来测量感兴趣的植物性状。测量这些植物性状或表型通常是一个瓶颈,因为需要熟练的人员、资源和充足的时间。此外,由于无法及时完成所需性状的“金标准”测量,因此只能对少数几个选育系或品种的植物表型性状进行量化。因此,已经开发并实施了许多方法来更好地了解作物和生态系统的生物学和生产。在本章中,我们解释了利用高光谱测量来估计光合作用不同方面的最新方法之一。值得注意的是,我们概述了使用高光谱辐射计和成像来快速估计光合作用的两个限速步骤:Rubisco(V)羧化的最大速率和 RuBP(J)的电子传递或再生成的最大速率。

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Methods Mol Biol. 2024;2790:355-372. doi: 10.1007/978-1-0716-3790-6_18.
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本文引用的文献

1
Advances in field-based high-throughput photosynthetic phenotyping.基于野外的高通量光合作用表型分析的进展。
J Exp Bot. 2022 May 23;73(10):3157-3172. doi: 10.1093/jxb/erac077.
2
Hyperspectral reflectance-based phenotyping for quantitative genetics in crops: Progress and challenges.基于高光谱反射率的作物数量遗传学表型分析:进展与挑战。
Plant Commun. 2021 May 27;2(4):100209. doi: 10.1016/j.xplc.2021.100209. eCollection 2021 Jul 12.
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A best-practice guide to predicting plant traits from leaf-level hyperspectral data using partial least squares regression.
使用偏最小二乘回归从叶片高光谱数据预测植物性状的最佳实践指南。
J Exp Bot. 2021 Sep 30;72(18):6175-6189. doi: 10.1093/jxb/erab295.
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Emerging approaches to measure photosynthesis from the leaf to the ecosystem.从叶片到生态系统的光合作用测量方法的新进展。
Emerg Top Life Sci. 2021 May 21;5(2):261-274. doi: 10.1042/ETLS20200292.
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Estimating photosynthetic traits from reflectance spectra: A synthesis of spectral indices, numerical inversion, and partial least square regression.从反射光谱估算光合特性:光谱指数综合、数值反演和偏最小二乘回归。
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High-throughput field phenotyping using hyperspectral reflectance and partial least squares regression (PLSR) reveals genetic modifications to photosynthetic capacity.利用高光谱反射率和偏最小二乘回归(PLSR)进行高通量田间表型分析揭示了光合能力的遗传修饰。
Remote Sens Environ. 2019 Sep 15;231:111176. doi: 10.1016/j.rse.2019.04.029.
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From the Arctic to the tropics: multibiome prediction of leaf mass per area using leaf reflectance.从北极到热带地区:使用叶片反射率预测叶面积质量的多生物群落预测。
New Phytol. 2019 Dec;224(4):1557-1568. doi: 10.1111/nph.16123. Epub 2019 Sep 17.
8
Hyperspectral Leaf Reflectance as Proxy for Photosynthetic Capacities: An Ensemble Approach Based on Multiple Machine Learning Algorithms.高光谱叶片反射率作为光合能力的替代指标:一种基于多种机器学习算法的集成方法。
Front Plant Sci. 2019 Jun 3;10:730. doi: 10.3389/fpls.2019.00730. eCollection 2019.
9
Quantifying impacts of enhancing photosynthesis on crop yield.量化增强光合作用对作物产量的影响。
Nat Plants. 2019 Apr;5(4):380-388. doi: 10.1038/s41477-019-0398-8. Epub 2019 Apr 8.
10
The rapid A/C response: a guide to best practices.快速A/C反应:最佳实践指南。
New Phytol. 2019 Jan;221(2):625-627. doi: 10.1111/nph.15383. Epub 2018 Sep 10.