Yang Jianqi, Tang Jishun, He Xiaoyun, Di Ran, Zhang Xiaosheng, Zhang Jinlong, Guo Xiaofei, Hu Wenping, Chu Mingxing
State Key Laboratory of Animal Biotech Breeding, Institute of Animal Science, Chinese Academy of Agricultural Sciences (CAAS), 100193, Beijing, China.
Institute of Animal Husbandry and Veterinary Medicine, Anhui Academy of Agricultural Sciences, 230031, Hefei, China.
BMC Genomics. 2024 Apr 22;25(1):392. doi: 10.1186/s12864-024-10191-8.
The pituitary directly regulates the reproductive process through follicle-stimulating hormone (FSH) and luteinizing hormone (LH). Transcriptomic research on the pituitaries of ewes with different FecB (fecundity Booroola) genotypes has shown that some key genes and lncRNAs play an important role in pituitary function and sheep fecundity. Our previous study found that ewes with FecB + + genotypes (without FecB mutation) still had individuals with more than one offspring per birth. It is hoped to analyze this phenomenon from the perspective of the pituitary transcriptome.
The 12 Small Tail Han Sheep were equally divided into polytocous sheep in the follicular phase (PF), polytocous sheep in the luteal phase (PL), monotocous sheep in the follicular phase (MF), and monotocous sheep in the luteal phase (ML). Pituitary tissues were collected after estrus synchronous treatment for transcriptomic analysis. A total of 384 differentially expressed genes (DEGs) (182 in PF vs. MF and 202 in PL vs. ML) and 844 differentially expressed lncRNAs (DELs) (427 in PF vs. MF and 417 in PL vs. ML) were obtained from the polytocous-monotocous comparison groups in the two phases. Functional enrichment analysis showed that the DEGs in the two phases were enriched in signaling pathways known to play an important role in sheep fecundity, such as calcium ion binding and cAMP signaling pathways. A total of 1322 target relationship pairs (551 pairs in PF vs. MF and 771 pairs in PL vs. ML) were obtained for the target genes prediction of DELs, of which 29 DEL-DEG target relationship pairs (nine pairs in PF vs. MF and twenty pairs in PL vs. ML). In addition, the competing endogenous RNA (ceRNA) networks were constructed to explore the regulatory relationships of DEGs, and some important regulatory relationship pairs were obtained.
According to the analysis results, we hypothesized that the pituitary first receives steroid hormone signals from the ovary and uterus and that VAV3 (Vav Guanine Nucleotide Exchange Factor 3), GABRG1 (Gamma-Aminobutyric Acid A Receptor, Gamma 1), and FNDC1 (Fibronectin Type III Domain Containing 1) played an important role in this process. Subsequently, the reproductive process was regulated by gonadotropins, and IGFBP1 (Insulin-like Growth Factor Binding Protein 1) was directly involved in this process, ultimately affecting litter size. In addition, TGIF1 (Transforming Growth Factor-Beta-Induced Factor 1) and TMEFF2 (Transmembrane Protein With EGF Like And Two Follistatin Like Domains 2) compensated for the effect of the FecB mutation and function by acting on TGF-β/SMAD signaling pathway, an important pathway for sheep reproduction. These results provided a reference for understanding the mechanism of multiple births in Small Tail Han Sheep without FecB mutation.
垂体通过促卵泡激素(FSH)和促黄体生成素(LH)直接调节生殖过程。对具有不同FecB(布鲁拉美利奴羊繁殖力)基因型的母羊垂体进行转录组学研究表明,一些关键基因和长链非编码RNA(lncRNA)在垂体功能和绵羊繁殖力中发挥重要作用。我们之前的研究发现,FecB ++基因型(无FecB突变)的母羊中仍有每胎产多只后代的个体。希望从垂体转录组的角度分析这一现象。
将12只小尾寒羊平均分为卵泡期多胎羊(PF)、黄体期多胎羊(PL)、卵泡期单胎羊(MF)和黄体期单胎羊(ML)。在发情同步处理后采集垂体组织进行转录组分析。从两个阶段的多胎-单胎比较组中获得了总共384个差异表达基因(DEG)(PF与MF比较中有182个,PL与ML比较中有202个)和844个差异表达lncRNA(DEL)(PF与MF比较中有427个,PL与ML比较中有417个)。功能富集分析表明,两个阶段的DEG在已知对绵羊繁殖力起重要作用的信号通路中富集,如钙离子结合和cAMP信号通路。对DEL进行靶基因预测共获得1322个靶标关系对(PF与MF比较中有551对,PL与ML比较中有771对),其中有29个DEL-DEG靶标关系对(PF与MF比较中有9对,PL与ML比较中有20对)。此外,构建了竞争性内源RNA(ceRNA)网络以探索DEG的调控关系,并获得了一些重要的调控关系对。
根据分析结果,我们推测垂体首先接收来自卵巢和子宫的类固醇激素信号,并且VAV3(Vav鸟嘌呤核苷酸交换因子3)、GABRG1(γ-氨基丁酸A受体,γ1)和FNDC1(含III型纤连蛋白结构域1)在此过程中起重要作用。随后,生殖过程由促性腺激素调节,IGFBP1(胰岛素样生长因子结合蛋白1)直接参与此过程,最终影响产仔数。此外,TGIF1(转化生长因子-β诱导因子1)和TMEFF2(含EGF样和两个卵泡抑素样结构域的跨膜蛋白2)通过作用于TGF-β/SMAD信号通路(绵羊繁殖的重要通路)来补偿FecB突变的影响并发挥作用。这些结果为理解无FecB突变的小尾寒羊多胎机制提供了参考。