Madej Ewelina, Lisek Anna, Brożyna Anna A, Cierniak Agnieszka, Wronski Norbert, Deptula Milena, Wardowska Anna, Wolnicka-Glubisz Agnieszka
Department of Biophysics and Cancer Biology, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Gronostajowa 7, 30-387, Kraków, Poland.
Department of Human Biology, Insitute of Biology, Faculty of Biological and Veterinary Sciences, Nicolaus Copernicus University, Lwowska1, 87-100, Toruń, Poland.
J Cancer Res Clin Oncol. 2024 Apr 24;150(4):209. doi: 10.1007/s00432-024-05732-3.
The receptor-interacting protein kinase (RIPK4) has an oncogenic function in melanoma, regulates NF-κB and Wnt/β-catenin pathways, and is sensitive to the BRAF inhibitors: vemurafenib and dabrafenib which lead to its decreased level. As its role in melanoma remains not fully understood, we examined the effects of its downregulation on the transcriptomic profile of melanoma.
Applying RNA-seq, we revealed global alterations in the transcriptome of WM266.4 cells with RIPK4 silencing. Functional partners of RIPK4 were evaluated using STRING and GeneMANIA databases. Cells with transient knockdown (via siRNA) and stable knockout (via CRISPR/Cas9) of RIPK4 were stimulated with TNF-α. The expression levels of selected proteins were assessed using Western blot, ELISA, and qPCR.
Global analysis of gene expression changes indicates a complex role for RIPK4 in regulating adhesion, migration, proliferation, and inflammatory processes in melanoma cells. Our study highlights potential functional partners of RIPK4 such as BIRC3, TNF-α receptors, and MAP2K6. Data from RIPK4 knockout cells suggest a putative role for RIPK4 in modulating TNF-α-induced production of IL-8 and IL-6 through two distinct signaling pathways-BIRC3/NF-κB and p38/MAPK. Furthermore, increased serum TNF-α levels and the correlation of RIPK4 with NF-κB were revealed in melanoma patients.
These data reveal a complex role for RIPK4 in regulating the immune signaling network in melanoma cells and suggest that this kinase may represent an alternative target for melanoma-targeted adjuvant therapy.
受体相互作用蛋白激酶(RIPK4)在黑色素瘤中具有致癌功能,调节核因子κB(NF-κB)和Wnt/β-连环蛋白信号通路,并且对BRAF抑制剂维莫非尼和达拉非尼敏感,这两种抑制剂会导致其水平降低。由于其在黑色素瘤中的作用尚未完全明确,我们研究了其表达下调对黑色素瘤转录组图谱的影响。
应用RNA测序技术,我们揭示了RIPK4沉默的WM266.4细胞转录组的整体变化。使用STRING和GeneMANIA数据库评估RIPK4的功能伙伴。用肿瘤坏死因子-α(TNF-α)刺激RIPK4瞬时敲低(通过小干扰RNA)和稳定敲除(通过CRISPR/Cas9)的细胞。使用蛋白质免疫印迹法、酶联免疫吸附测定法和定量聚合酶链反应评估所选蛋白质的表达水平。
基因表达变化的整体分析表明,RIPK4在调节黑色素瘤细胞的黏附、迁移、增殖和炎症过程中具有复杂作用。我们的研究突出了RIPK4的潜在功能伙伴,如BIRC3、TNF-α受体和丝裂原活化蛋白激酶激酶6(MAP2K6)。来自RIPK4敲除细胞的数据表明,RIPK4可能通过两条不同的信号通路——BIRC3/NF-κB和p38/丝裂原活化蛋白激酶(MAPK)——调节TNF-α诱导的白细胞介素-8(IL-8)和白细胞介素-6(IL-6)的产生。此外,黑色素瘤患者血清TNF-α水平升高以及RIPK4与NF-κB的相关性也被揭示。
这些数据揭示了RIPK4在调节黑色素瘤细胞免疫信号网络中的复杂作用,并表明该激酶可能是黑色素瘤靶向辅助治疗的另一个靶点。