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伴侣蛋白中蛋白质折叠的外力场——在蛋白质折叠中的潜在应用

External Force Field for Protein Folding in Chaperonins-Potential Application in Protein Folding.

作者信息

Roterman Irena, Stapor Katarzyna, Dułak Dawid, Konieczny Leszek

机构信息

Department of Bioinformatics and Telemedicine, Jagiellonian University-Medical College, Medyczna 7, Kraków 30-688, Poland.

Faculty of Automatic, Electronics and Computer Science, Department of Applied Informatics, Silesian University of Technology, Akademicka 16, Gliwice 44-100, Poland.

出版信息

ACS Omega. 2024 Apr 10;9(16):18412-18428. doi: 10.1021/acsomega.4c00409. eCollection 2024 Apr 23.

Abstract

The present study discusses the influence of the TRiC chaperonin involved in the folding of the component of reovirus mu1/σ3. The TRiC chaperone is treated as a provider of a specific external force field in the fuzzy oil drop model during the structural formation of a target folded protein. The model also determines the status of the final product, which represents the structure directed by an external force field in the form of a chaperonin. This can be used for folding as the process is environment-dependent. The application of the model enables the quantitative assessment of the folding dependence of an external force field, which appears to have universal application.

摘要

本研究讨论了参与呼肠孤病毒mu1/σ3组分折叠的TRiC伴侣蛋白的影响。在目标折叠蛋白的结构形成过程中,TRiC伴侣蛋白在模糊油滴模型中被视为特定外力场的提供者。该模型还确定了最终产物的状态,该状态代表了以伴侣蛋白形式存在的外力场指导的结构。由于该过程依赖于环境,因此可用于折叠。该模型的应用能够对外力场的折叠依赖性进行定量评估,这似乎具有普遍适用性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/968e/11044213/0ec687017651/ao4c00409_0001.jpg

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