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一种作为前体RNA进化早期达尔文祖先的益生元遗传核苷酸。

A Prebiotic Genetic Nucleotide as an Early Darwinian Ancestor for Pre-RNA Evolution.

作者信息

Sawant Anupam A, Tripathi Sneha, Galande Sanjeev, Rajamani Sudha

机构信息

Department of Biology, Indian Institute of Science Education and Research (IISER) Pune, Dr Homi Bhabha Road, Pune, Maharashtra 411008, India.

Center of Excellence in Epigenetics, Department of Life Sciences, School of Natural Sciences, Shiv Nadar Institution of Eminence, Gautam Buddha Nagar, Uttar Pradesh 201314, India.

出版信息

ACS Omega. 2024 Apr 12;9(16):18072-18082. doi: 10.1021/acsomega.3c09949. eCollection 2024 Apr 23.

Abstract

Prebiotic genetic nucleotides (PGNs) often outcompete canonical alphabets in the formation of nucleotides and subsequent RNA oligomerization under early Earth conditions. This indicates that the early genetic code might have been dominated by pre-RNA that contained PGNs for information transfer and catalysis. Despite this, deciphering pre-RNAs' capacity to acquire function and delineating their evolutionary transition to a canonical RNA World has remained under-researched in the origins of life (OoL) field. We report the synthesis of a prebiotically relevant nucleotide (BaTP) containing the noncanonical nucleobase barbituric acid. We demonstrate the first instance of its enzymatic incorporation into an RNA, using a T7 RNA polymerase. BaTP's incorporation into baby spinach aptamer allowed it to retain its overall secondary structure and function. Finally, we also demonstrate faithful transfer of information from the pre-RNA-containing BaTP to DNA, using a high-fidelity RNA-dependent DNA polymerase, alluding to how selection pressures and complexities could have ensued during the molecular evolution of the early genetic code.

摘要

益生元遗传核苷酸(PGNs)在早期地球条件下形成核苷酸及随后的RNA寡聚化过程中,常常比标准字母表更具竞争力。这表明早期遗传密码可能由包含用于信息传递和催化的PGNs的前RNA主导。尽管如此,在生命起源(OoL)领域,对前RNA获取功能的能力的破译以及描绘它们向标准RNA世界的进化转变仍未得到充分研究。我们报告了一种含有非标准核碱基巴比妥酸的益生元相关核苷酸(BaTP)的合成。我们展示了使用T7 RNA聚合酶将其酶促掺入RNA的首个实例。BaTP掺入小菠菜适体使其能够保留其整体二级结构和功能。最后,我们还展示了使用高保真RNA依赖性DNA聚合酶将含BaTP的前RNA中的信息忠实地转移到DNA,这暗示了在早期遗传密码的分子进化过程中可能随之而来的选择压力和复杂性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5911/11044211/6960eb2c2326/ao3c09949_0005.jpg

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