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A02的完整基因组序列

Complete genome sequence of A02.

作者信息

Li Jiahao, Wu Xiuyun, Xing Sheng, Ding Bo

机构信息

The State Key Laboratory of Microbial Technology, Shandong University, Qingdao, Shandong, China.

2Shan Dong Institute for Food and Drug Control, Jinan, Shandong, China.

出版信息

Microbiol Resour Announc. 2024 Jun 11;13(6):e0008224. doi: 10.1128/mra.00082-24. Epub 2024 May 2.

DOI:10.1128/mra.00082-24
PMID:38695579
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11237647/
Abstract

a facultative anaerobic gram-positive bacterium, is commonly found in the gut of humans and animals, as well as in dairy products and plant ferments. Here, we report the complete genome sequence of A02, whose total genome length is 3,038,472 bp, with a GC content of 46.41%.

摘要

一种兼性厌氧革兰氏阳性菌，常见于人和动物的肠道以及乳制品和植物发酵物中。在此，我们报告了A02的完整基因组序列，其基因组全长为3,038,472 bp，GC含量为46.41%。

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本文引用的文献

1
Performance of neural network basecalling tools for Oxford Nanopore sequencing.基于神经网络的牛津纳米孔测序碱基调用工具的性能。
Genome Biol. 2019 Jun 24;20(1):129. doi: 10.1186/s13059-019-1727-y.
2
Comparative genomic and metabolic analysis of three Lactobacillus paracasei cheese isolates reveals considerable genomic differences in strains from the same niche.对 3 株干酪乳杆菌奶酪分离株的比较基因组学和代谢分析揭示了来自同一生态位的菌株在基因组上存在相当大的差异。
BMC Genomics. 2018 Mar 20;19(1):205. doi: 10.1186/s12864-018-4586-0.
3
Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.单轮循环器：从短读长和长读长测序数据中解析细菌基因组组装结果
PLoS Comput Biol. 2017 Jun 8;13(6):e1005595. doi: 10.1371/journal.pcbi.1005595. eCollection 2017 Jun.
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NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
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Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement.Pilon：一种用于全面微生物变异检测和基因组组装改进的集成工具。
PLoS One. 2014 Nov 19;9(11):e112963. doi: 10.1371/journal.pone.0112963. eCollection 2014.