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本文引用的文献

1
Cloning of two gene clusters involved in the catabolism of 2,4-dinitrophenol by Paraburkholderia sp. strain KU-46 and characterization of the initial DnpAB enzymes and a two-component monooxygenases DnpC1C2.两株参与 2,4-二硝基酚代谢的基因簇的克隆,及其初始 DnpAB 酶和两种组分单加氧酶 DnpC1C2 的特性。
J Biosci Bioeng. 2023 Sep;136(3):223-231. doi: 10.1016/j.jbiosc.2023.05.013. Epub 2023 Jun 19.
2
Complete Genome Sequence of Paraburkholderia terrae Strain KU-15, a 2-Nitrobenzoate-Degrading Bacterium.2-硝基苯甲酸降解菌土栖副伯克霍尔德氏菌KU-15的全基因组序列
Microbiol Resour Announc. 2022 Jul 21;11(7):e0037322. doi: 10.1128/mra.00373-22. Epub 2022 Jun 22.
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Identification and characterization of a novel class of self-sufficient cytochrome P450 hydroxylase involved in cyclohexanecarboxylate degradation in Paraburkholderia terrae strain KU-64.鉴定并描述一类新型的自养细胞色素 P450 羟化酶,该酶参与土壤杆菌属 KU-64 菌株中环己烷羧酸降解。
Biosci Biotechnol Biochem. 2022 Jan 24;86(2):199-208. doi: 10.1093/bbb/zbab199.
4
Burkholderia: An Untapped but Promising Bacterial Genus for the Conversion of Aromatic Compounds.伯克霍尔德氏菌:一个有待开发但有前景的细菌属,可用于芳香族化合物的转化。
Trends Biotechnol. 2020 Sep;38(9):963-975. doi: 10.1016/j.tibtech.2020.02.008. Epub 2020 Mar 18.
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Nat Commun. 2019 May 16;10(1):2182. doi: 10.1038/s41467-019-10210-3.
6
Biodegradation of naphthalene, BTEX, and aliphatic hydrocarbons by Paraburkholderia aromaticivorans BN5 isolated from petroleum-contaminated soil.从石油污染土壤中分离得到的芳香噬雀菌 BN5 对萘、BTEX 和脂肪族烃的生物降解。
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7
DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication.DFAST:一个灵活的原核生物基因组注释管道,用于更快地发布基因组。
Bioinformatics. 2018 Mar 15;34(6):1037-1039. doi: 10.1093/bioinformatics/btx713.
8
Isolation and characterization of a new 2,4-dinitrophenol-degrading bacterium Burkholderia sp. strain KU-46 and its degradation pathway.一株新的2,4-二硝基苯酚降解菌伯克霍尔德氏菌属菌株KU-46的分离、鉴定及其降解途径
FEMS Microbiol Lett. 2007 Sep;274(1):112-7. doi: 10.1111/j.1574-6968.2007.00816.x. Epub 2007 Jun 21.

2,4-二硝基苯酚降解菌KU-46菌株的全基因组序列

Complete genome sequence of strain KU-46, a 2,4-dinitrophenol-degrading bacterium.

作者信息

Tanaka Tomoki, Okano Kenji, Iwaki Hiroaki

机构信息

Department of Life Science and Biotechnology, Kansai University, Suita, Osaka, Japan.

出版信息

Microbiol Resour Announc. 2024 Jun 11;13(6):e0028224. doi: 10.1128/mra.00282-24. Epub 2024 May 3.

DOI:10.1128/mra.00282-24
PMID:38700342
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11237480/
Abstract

strain KU-46 has been studied for its capability to degrade 2,4-dinitrophenol. Here, we present the complete 10,833,180bp genome of this microorganism, comprising five circular chromosomes housing 9,797 protein-coding sequences. The genes responsible for 2,4-dinitrophenol and 4-nitrophenol degradation are located on chromosome 2.

摘要

对菌株KU - 46降解2,4 - 二硝基苯酚的能力进行了研究。在此,我们展示了这种微生物完整的10,833,180碱基对基因组,其由五条环状染色体组成,包含9,797个蛋白质编码序列。负责降解2,4 - 二硝基苯酚和4 - 硝基苯酚的基因位于2号染色体上。